RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ARMC7Q9H6L4 198 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ARMCX1Q9P291 453 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 PROCRQ9UNN8 238 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 TMED7Q9Y3B3 224 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SPIN1Q9Y657 262 aaPredicted RBP13.92□□□□□ -0.18
HMGA1-206ENST00000478214 LOC100653049A0A140TA62 436 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 SULT2B1O00204 365 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 KRT34O76011 436 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 AQP1P29972 269 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 PEX19P40855 299 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 DIO1P49895 249 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 SEC24CP53992 1094 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 SORDQ00796 357 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 CYP51A1Q16850 503 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 REP15Q6BDI9 236 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 GTF2IRD2BQ6EKJ0 949 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 GTF2IRD2Q86UP8 949 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 COMTD1Q86VU5 262 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 CADM2Q8N3J6 435 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 OR6K3Q8NGY3 331 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 ARL5BQ96KC2 179 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 KAT8Q9H7Z6 458 aaKnown RBP13.91□□□□□ -0.18
HMGA1-206ENST00000478214 MCCC2Q9HCC0 563 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 GLRX2Q9NS18 164 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 CAPN7Q9Y6W3 813 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 POLQO75417 2590 aa13.91□□□□□ -0.18
HMGA1-206ENST00000478214 TMEM72A0PK05 275 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 TUBAL3A6NHL2 446 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 FXYD1O00168 92 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 MRASO14807 208 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 SMAD9O15198 467 aaKnown RBP13.9□□□□□ -0.18
HMGA1-206ENST00000478214 TPST1O60507 370 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 PRKD3O94806 890 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 FESP07332 822 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 AGTR1P30556 359 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 ADSLP30566 484 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-206ENST00000478214 PRKAR1BP31321 381 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 GYS2P54840 703 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 COPZ1P61923 177 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 HOXC5Q00444 222 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 FAM27E3Q08E93 113 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 CYLC2Q14093 348 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-206ENST00000478214 RNPS1Q15287 305 aaKnown RBP13.9□□□□□ -0.18
HMGA1-206ENST00000478214 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 GLIPR1L2Q4G1C9 344 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 COQ5Q5HYK3 327 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 WBP2NLQ6ICG8 309 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 NANOGP8Q6NSW7 305 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 DHRS4L2Q6PKH6 230 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 KRT73Q86Y46 540 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 TUSC5Q8IXB3 177 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 C11orf65Q8NCR3 313 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 OR10A6Q8NH74 314 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 FAM222BQ8WU58 562 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 LURAP1Q96LR2 239 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 ELAC2Q9BQ52 826 aaKnown RBP13.9□□□□□ -0.18
HMGA1-206ENST00000478214 SPATA5L1Q9BVQ7 753 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 NANOGQ9H9S0 305 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 PLSCR4Q9NRQ2 329 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 ANGPT4Q9Y264 503 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 HDGFL3Q9Y3E1 203 aa13.9□□□□□ -0.18
HMGA1-206ENST00000478214 ZC3H12DA2A288 527 aaKnown RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 BBIP1A8MTZ0 92 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 FKBP2P26885 142 aaKnown RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 CD79BP40259 229 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 KCNJ5P48544 419 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 PCBP3P57721 371 aaKnown RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 CSNK2A1P68400 391 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 RBBP4Q09028 425 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 EXOC3L2Q2M3D2 409 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 RABL3Q5HYI8 236 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 TMEM201Q5SNT2 666 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 NUFIP2Q7Z417 695 aaKnown RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 SPATA21Q7Z572 469 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 NET1Q7Z628 596 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 SLC43A2Q8N370 569 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 POU5F2Q8N7G0 328 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 LRRC58Q96CX6 371 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 ZNF607Q96SK3 696 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 FAM107BQ9H098 131 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 PIF1Q9H611 641 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 C12orf49Q9H741 205 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 KLHL13Q9P2N7 655 aa13.89□□□□□ -0.19
HMGA1-206ENST00000478214 ING1Q9UK53 422 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-206ENST00000478214 SLC22A2O15244 555 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 ZNF208O43345 1280 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 CYTIPO60759 359 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 GCM2O75603 506 aaPredicted RBP13.88□□□□□ -0.19
HMGA1-206ENST00000478214 MFN2O95140 757 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 PMS2P2O95744 297 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 EPXP11678 715 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 IMPDH2P12268 514 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 POU2F1P14859 743 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 DRD4P21917 467 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 CXCR1P25024 350 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 LSP1P33241 339 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 GZMMP51124 257 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms