RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SLC43A2Q8N370 569 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 RNF138Q8WVD3 245 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 SNRNP27Q8WVK2 155 aaKnown RBP11.15□□□□□ -0.62
MRPL55-227ENST00000475832 SGTBQ96EQ0 304 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 HRASLS5Q96KN8 279 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 PITX2Q99697 317 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 TMEM43Q9BTV4 400 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 TIMMDC1Q9NPL8 285 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 STMN3Q9NZ72 180 aa11.15□□□□□ -0.62
MRPL55-227ENST00000475832 NDRG4Q9ULP0 352 aaKnown RBP11.15□□□□□ -0.62
MRPL55-227ENST00000475832 COL6A6A6NMZ7 2263 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 IGLV3-32A0A0A0MS00 114 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 ANKRD33BA6NCL7 494 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 ZNF891A8MT65 544 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 B8ZZF3 427 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 KPNA4O00629 521 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 OIP5O43482 229 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 HCN1O60741 890 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 LYPD3O95274 346 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 IGF2P01344 180 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 LYNP07948 512 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 GNAO1P09471 354 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 CHMP24386 653 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 TACR3P29371 465 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 GPR4P46093 362 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 MAP2K6P52564 334 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 CSNK2BP67870 215 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 CRYZQ08257 329 aaKnown RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 Q0VFX4 171 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 PTGES3Q15185 160 aaKnown RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 LINC00114Q6XXX2 140 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 TMPRSS11FQ6ZWK6 438 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 ATG4DQ86TL0 474 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 P3H2Q8IVL5 708 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 C10orf53Q8N6V4 93 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 FAM81AQ8TBF8 368 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 GPR119Q8TDV5 335 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 PAQR8Q8TEZ7 354 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 SLC38A2Q96QD8 506 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 UTP23Q9BRU9 249 aaKnown RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 ANGPTL4Q9BY76 406 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 SACM1LQ9NTJ5 587 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 TBC1D23Q9NUY8 699 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 SCN3BQ9NY72 215 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 SPIN1Q9Y657 262 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 CHCHD2Q9Y6H1 151 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-227ENST00000475832 CDH10Q9Y6N8 788 aa11.14□□□□□ -0.63
MRPL55-227ENST00000475832 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 A0A087WZY1 265 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 GNB5O14775 395 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 KLK10O43240 276 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 PIP5K1CO60331 668 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ADAM11O75078 769 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 SOX14O95416 240 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 CLIC3O95833 236 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 HIST1H2ABP04908 130 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 FUT4P22083 530 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 POLR2IP36954 125 aaKnown RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 APOBEC1P41238 236 aaKnown RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 EIF1P41567 113 aaKnown RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 SLC9A3P48764 834 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 GAS1P54826 345 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 UCNP55089 124 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 RAPSNQ13702 412 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 CRTC2Q53ET0 693 aaPredicted RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 RBM48Q5RL73 367 aaKnown RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 AGAP7PQ5VUJ5 663 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 BROXQ5VW32 411 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 SLC27A4Q6P1M0 643 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 HIST3H2AQ7L7L0 130 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 OAFQ86UD1 273 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 VASH2Q86V25 355 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 BEST3Q8N1M1 668 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 GALNT16Q8N428 558 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 AMER2Q8N7J2 671 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 FANK1Q8TC84 345 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 TRUB1Q8WWH5 349 aaKnown RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 HDAC2Q92769 488 aaKnown RBP11.13□□□□□ -0.63
MRPL55-227ENST00000475832 HIST1H2ACQ93077 130 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 PLEKHA8Q96JA3 519 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 Q96MT0 163 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 AGAP4Q96P64 663 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ZNF426Q9BUY5 554 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 RTN4RQ9BZR6 473 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ADAM19Q9H013 955 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 ADNPQ9H2P0 1102 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 DSN1Q9H410 356 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 GALNT9Q9HCQ5 603 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 MED11Q9P086 117 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 REV1Q9UBZ9 1251 aa11.13□□□□□ -0.63
MRPL55-227ENST00000475832 POLHQ9Y253 713 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms