RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 LRR1Q96L50 414 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 FAIM2Q9BWQ8 316 aa12.04□□□□□ -0.48
CCNL1-216ENST00000475298 FGF20Q9NP95 211 aaPredicted RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 APOBEC3BQ9UH17 382 aaKnown RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 MRTO4Q9UKD2 239 aaKnown RBP12.04□□□□□ -0.48
CCNL1-216ENST00000475298 SCN2AQ99250 2005 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 CHURC1-FNTBB4DL54 471 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 SGCEO43556 437 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 ECDO95905 644 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 MT-ND4P03905 459 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 EN2P19622 333 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 NPR2P20594 1047 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 C5AR1P21730 350 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 GDI1P31150 447 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 S100A11P31949 105 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 ACSL1P33121 698 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 KCNJ3P48549 501 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 KHKP50053 298 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 EFNB1P98172 346 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 MC2RQ01718 297 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 MELKQ14680 651 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 MICBQ29980 383 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 RNASE12Q5GAN4 147 aaKnown RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 SLC25A30Q5SVS4 291 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 PRICKLE2Q7Z3G6 844 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 NAXDQ8IW45 347 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 YAF2Q8IY57 180 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 SAMD12Q8N8I0 201 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 OR9A2Q8NGT5 310 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 OR6S1Q8NH40 331 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 POLDIP3Q9BY77 421 aaKnown RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 PLA2G12AQ9BZM1 189 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 C6orf106Q9H6K1 298 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 FGF22Q9HCT0 170 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 MRPS18AQ9NVS2 196 aaKnown RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 GDE1Q9NZC3 331 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 NTMQ9P121 344 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 FLVCR2Q9UPI3 526 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 PRICKLE3O43900 615 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 RP2O75695 350 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 GATBO75879 557 aaKnown RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 HLA-DPB1P04440 258 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 WNT1P04628 370 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 APODP05090 189 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 MC3RP41968 323 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 TRA2BP62995 288 aaKnown RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 ZNF155Q12901 538 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 GINS1Q14691 196 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 RPE65Q16518 533 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 SWI5Q1ZZU3 235 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 EOGTQ5NDL2 527 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 C5orf46Q6UWT4 87 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 SLC16A13Q7RTY0 426 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 KAT2AQ92830 837 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 FGF14Q92915 247 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 ZNF764Q96H86 408 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 TIMM29Q9BSF4 260 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 TMPRSS13Q9BYE2 586 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 SLC17A9Q9BYT1 436 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 C20orf85Q9H1P6 137 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 EGLN3Q9H6Z9 239 aa12.03□□□□□ -0.48
CCNL1-216ENST00000475298 GPR55Q9Y2T6 319 aaPredicted RBP12.03□□□□□ -0.48
CCNL1-216ENST00000475298 TRBV23OR9-2A0A075B6M9 112 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 A0A1W2PRQ8 180 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 PEX14O75381 377 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 ADH1BP00325 375 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 EGFP01133 1207 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 IFNA4P05014 189 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 PTNP21246 168 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 RFC3P40938 356 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 DGCR2P98153 550 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 HTR4Q13639 388 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 TMEM35AQ53FP2 167 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 OR5M10Q6IEU7 315 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 MRM1Q6IN84 353 aaKnown RBP12.02□□□□□ -0.49
CCNL1-216ENST00000475298 PYHIN1Q6K0P9 492 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 SLC30A6Q6NXT4 461 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 PARM1Q6UWI2 310 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 VRK2Q86Y07 508 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 CAMKVQ8NCB2 501 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 MORN4Q8NDC4 146 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 BPIFCQ8NFQ6 507 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 MRPL48Q96GC5 212 aaKnown RBP12.02□□□□□ -0.49
CCNL1-216ENST00000475298 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 C1QTNF2Q9BXJ5 285 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 TRPV4Q9HBA0 871 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 SLC22A11Q9NSA0 550 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.49
CCNL1-216ENST00000475298 OR2M5A3KFT3 312 aa12.01□□□□□ -0.49
CCNL1-216ENST00000475298 LINC01565O15544 149 aa12.01□□□□□ -0.49
CCNL1-216ENST00000475298 GATCO43716 136 aaKnown RBP12.01□□□□□ -0.49
CCNL1-216ENST00000475298 FZD7O75084 574 aa12.01□□□□□ -0.49
CCNL1-216ENST00000475298 RASGRP1O95267 797 aa12.01□□□□□ -0.49
CCNL1-216ENST00000475298 ACP2P11117 423 aa12.01□□□□□ -0.49
CCNL1-216ENST00000475298 SELLP14151 372 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms