RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 VPS33AQ96AX1 596 aa18.24■□□□□ 0.51
SNX13-206ENST00000474067 SPDL1Q96EA4 605 aa18.24■□□□□ 0.51
SNX13-206ENST00000474067 PSD2Q9BQI7 771 aa18.24■□□□□ 0.51
SNX13-206ENST00000474067 ACTR6Q9GZN1 396 aa18.24■□□□□ 0.51
SNX13-206ENST00000474067 CCDC167Q9P0B6 97 aa18.24■□□□□ 0.51
SNX13-206ENST00000474067 TMEM181Q9P2C4 612 aa18.24■□□□□ 0.51
SNX13-206ENST00000474067 CDHR4A6H8M9 788 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 EVPLLA8MZ36 301 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 TFPTP0C1Z6 253 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 H2AFXP16104 143 aaPredicted RBP18.23■□□□□ 0.51
SNX13-206ENST00000474067 CCKARP32238 428 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 SLC35A1P78382 337 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 EPS8Q12929 822 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 ITGADQ13349 1161 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 RGNQ15493 299 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 DEFB113Q30KQ7 82 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 OLIG3Q7RTU3 272 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 ZNF100Q8IYN0 542 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 SLC38A5Q8WUX1 472 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 CNOT9Q92600 299 aaKnown RBP18.23■□□□□ 0.51
SNX13-206ENST00000474067 NRGNQ92686 78 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 KISS1RQ969F8 398 aaPredicted RBP18.23■□□□□ 0.51
SNX13-206ENST00000474067 ZG16BQ96DA0 208 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 ZC3HAV1LQ96H79 300 aaKnown RBP18.23■□□□□ 0.51
SNX13-206ENST00000474067 A4GALTQ9NPC4 353 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 C6orf203Q9P0P8 240 aaPredicted RBP18.23■□□□□ 0.51
SNX13-206ENST00000474067 PCDHB14Q9Y5E9 798 aa18.23■□□□□ 0.51
SNX13-206ENST00000474067 HEATR5AQ86XA9 2040 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 TMED7-TICAM2A0A0A6YYA0 188 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 PRAMEF27A3QJZ7 478 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 NR5A2O00482 541 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 SMAD9O15198 467 aaKnown RBP18.22■□□□□ 0.51
SNX13-206ENST00000474067 TMCC2O75069 709 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 FESP07332 822 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 NCF2P19878 526 aaPredicted RBP18.22■□□□□ 0.51
SNX13-206ENST00000474067 CXCR1P25024 350 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 OR3A2P47893 321 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 MVDP53602 400 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 LRIF1Q5T3J3 769 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 SFRP5Q5T4F7 317 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 WBP2NLQ6ICG8 309 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 Q6ZT83 130 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 BHLHE22Q8NFJ8 381 aaPredicted RBP18.22■□□□□ 0.51
SNX13-206ENST00000474067 HSD17B8Q92506 261 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 TMEM19Q96HH6 336 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 PIP5K1AQ99755 562 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 SPATA9Q9BWV2 254 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 EVA1AQ9H8M9 152 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 BCL2L10Q9HD36 194 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 PARPBPQ9NWS1 579 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 TMED7Q9Y3B3 224 aa18.22■□□□□ 0.51
SNX13-206ENST00000474067 ARHGEF9O43307 516 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 ATE1O95260 518 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 VIMP08670 466 aaKnown RBP18.21■□□□□ 0.51
SNX13-206ENST00000474067 BMP2P12643 396 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 TACR3P29371 465 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 ABLIM2Q6H8Q1 611 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 SLC2A7Q6PXP3 512 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 P2RY8Q86VZ1 359 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 ADGRG3Q86Y34 549 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 GABRG1Q8N1C3 465 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 TSPEARQ8WU66 669 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 EBF4Q9BQW3 602 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 POTEKPQ9BYX7 375 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 PAIP1Q9H074 479 aaKnown RBP18.21■□□□□ 0.51
SNX13-206ENST00000474067 LEF1Q9UJU2 399 aaPredicted RBP18.21■□□□□ 0.51
SNX13-206ENST00000474067 ZNF443Q9Y2A4 671 aaPredicted RBP18.21■□□□□ 0.51
SNX13-206ENST00000474067 NOSIPQ9Y314 301 aaKnown RBP18.21■□□□□ 0.51
SNX13-206ENST00000474067 GMEB1Q9Y692 573 aa18.21■□□□□ 0.51
SNX13-206ENST00000474067 IGKV3D-15A0A087WSY6 115 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 A0A1W2PP18 115 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 CLDN24A6NM45 220 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 DEFB108AA8MXU0 73 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 GPIP06744 558 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 ETS2P15036 469 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 OR2B6P58173 313 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 AGKQ53H12 422 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 ZNF311Q5JNZ3 666 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 GCNT6Q5T4J0 391 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 C1QTNF12Q5T7M4 302 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 METTL21CQ5VZV1 264 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 ANKRD34AQ69YU3 496 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 CXorf67Q86X51 503 aaPredicted RBP18.2■□□□□ 0.5
SNX13-206ENST00000474067 MUCL1Q96DR8 90 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 ZNF607Q96SK3 696 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 TAPBPLQ9BX59 468 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 LIME1Q9H400 295 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 PIF1Q9H611 641 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 ESRP2Q9H6T0 727 aaKnown RBP18.2■□□□□ 0.5
SNX13-206ENST00000474067 OSGIN1Q9UJX0 560 aa18.2■□□□□ 0.5
SNX13-206ENST00000474067 IGHV3-15A0A0B4J1V0 119 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 PRORSD1PA6NEY8 169 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 MRPL33O75394 65 aaKnown RBP18.19■□□□□ 0.5
SNX13-206ENST00000474067 CD99P14209 185 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 IDUAP35475 653 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 SLC16A1P53985 500 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 ACKR1Q16570 336 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 SHEQ5VZ18 495 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 ZNF836Q6ZNA1 936 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 NUFIP2Q7Z417 695 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms