RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ADAMDEC1O15204 470 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 AGAP20933 346 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 CD247P20963 164 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 CHRNB4P30926 498 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 MAP2K6P52564 334 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ZNF136P52737 540 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 HSPB2Q16082 182 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 CTU2Q2VPK5 515 aaKnown RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 CYBRD1Q53TN4 286 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 SYT14P1Q58G82 188 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ADGRE4PQ86SQ3 457 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ADGRG3Q86Y34 549 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 C9orf106Q8NAJ2 232 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 RBM15BQ8NDT2 890 aaKnown RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 FNDC9Q8TBE3 224 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ITLN2Q8WWU7 325 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 LZICQ8WZA0 190 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 CPNE4Q96A23 557 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 FAM162AQ96A26 154 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 TPD52L3Q96J77 140 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ADGRG7Q96K78 797 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 UCN2Q96RP3 112 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ARHGDIGQ99819 225 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ADAM19Q9H013 955 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 Q9UFV3 132 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 EGFL7Q9UHF1 273 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 SH3GLB1Q9Y371 365 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ZNF175Q9Y473 711 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 ARHGAP21Q5T5U3 1957 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 DIDO1Q9BTC0 2240 aaKnown RBP11.15□□□□□ -0.63
DDX56-209ENST00000473924 TMEM72A0PK05 275 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ELOA3DA6NLF2 546 aaPredicted RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 SULT2B1O00204 365 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ZNF208O43345 1280 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 TOXO94900 526 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 UBOX5O94941 541 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ZNF682O95780 498 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 TGM6O95932 706 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 TMIGD3P0DMS9 266 aaPredicted RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 T-ENOLP0DO92 83 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 FCGR2AP12318 317 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 NCK1P16333 377 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 GGT1P19440 569 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 HTR1EP28566 365 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 CEACAM8P31997 349 aaPredicted RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 CLK1P49759 484 aaKnown RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 CRYBA2P53672 197 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 CSNK2A1P68400 391 aaPredicted RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 OR1Q1Q15612 314 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 NRF1Q16656 503 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ELOA3BQ3SY89 546 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ALG10BQ5I7T1 473 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 GLYATQ6IB77 296 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 OR2A2Q6IF42 318 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 RINLQ6ZS11 566 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 GCNT2Q8N0V5 402 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 FAM156AQ8NDB6 213 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ELOA3Q8NG57 546 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 OR6T1Q8NGN1 323 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 C3orf49Q96BT1 292 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 INTS12Q96CB8 462 aaKnown RBP11.14□□□□□ -0.63
DDX56-209ENST00000473924 DNAJA3Q96EY1 480 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 ZFP3Q96NJ6 502 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 MCHR1Q99705 422 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 OR11A1Q9GZK7 315 aa11.14□□□□□ -0.63
DDX56-209ENST00000473924 A0A1B0GWA3 101 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 A1L4Q6 167 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 DVL2O14641 736 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 FMO6PO60774 539 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 RCBTB2O95199 551 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 CLDN14O95500 239 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 PLGP00747 810 aaPredicted RBP11.13□□□□□ -0.63
DDX56-209ENST00000473924 SERPINA1P01009 418 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 PNMTP11086 282 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 HSD17B1P14061 328 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 TNFRSF1BP20333 461 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 BMP5P22003 454 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 CTSSP25774 331 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 HTR2AP28223 471 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 CPOXP36551 454 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 DIO1P49895 249 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 RAC3P60763 192 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 SELENOWP63302 87 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 BNIP2Q12982 314 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 MYBPHQ13203 477 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 SPATS1Q496A3 300 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 ULK3Q6PHR2 472 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 TMPPEQ6ZT21 453 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 FKBP9P1Q75LS8 142 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 CARM1Q86X55 608 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 RBM45Q8IUH3 476 aaKnown RBP11.13□□□□□ -0.63
DDX56-209ENST00000473924 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 NAXEQ8NCW5 288 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 ZHX1-C8orf76Q96EF9 292 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms