RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 VANGL1Q8TAA9 524 aaPredicted RBP17■□□□□ 0.31
LMNB1-204ENST00000463908 OSTF1Q92882 214 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 ZNF559Q9BR84 538 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 TRIM2Q9C040 744 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 OR11A1Q9GZK7 315 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 PCDHAC1Q9H158 963 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 COQ10BQ9H8M1 238 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 BAG5Q9UL15 447 aa17■□□□□ 0.31
LMNB1-204ENST00000463908 KIAA1549Q9HCM3 1950 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 A0A1B0GWA3 101 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 A0A1W2PNR3 127 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 CXCL13O43927 109 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 SERPINA1P01009 418 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 THY1P04216 161 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 CEACAM8P31997 349 aaPredicted RBP16.99■□□□□ 0.31
LMNB1-204ENST00000463908 EIF1AXP47813 144 aaKnown RBP16.99■□□□□ 0.31
LMNB1-204ENST00000463908 OR1E2P47887 323 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 BNIP2Q12982 314 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 CDSNQ15517 529 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 HBMQ6B0K9 141 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 VTCN1Q7Z7D3 282 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 ATG4DQ86TL0 474 aaPredicted RBP16.99■□□□□ 0.31
LMNB1-204ENST00000463908 CARM1Q86X55 608 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 EID3Q8N140 333 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 C9orf106Q8NAJ2 232 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 TPD52L3Q96J77 140 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 ARL5BQ96KC2 179 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 MCHR1Q99705 422 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 GORASP2Q9H8Y8 452 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 TESQ9UGI8 421 aaKnown RBP16.99■□□□□ 0.31
LMNB1-204ENST00000463908 HIVEP3Q5T1R4 2406 aa16.99■□□□□ 0.31
LMNB1-204ENST00000463908 A0A0G2JNJ9 132 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 ZC3H12DA2A288 527 aaKnown RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 MBD3L4A6NDZ8 208 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 MBD3L3A6NE82 208 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 MBD3L5A6NJ08 208 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 GJE1A6NN92 205 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 ZNF208O43345 1280 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 FMO6PO60774 539 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 CXCR1P25024 350 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 TIMP3P35625 211 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 CARD18P57730 90 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 RPS3AP61247 264 aaKnown RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 SGCBQ16585 318 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 SYT14P1Q58G82 188 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 C3orf33Q6P1S2 294 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 MTFR2Q6P444 385 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 MYO7BQ6PIF6 2116 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 CHMP1BQ7LBR1 199 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 CCDC71Q8IV32 467 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 ARHGAP24Q8N264 748 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 NAXEQ8NCW5 288 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 MBD3L2Q8NHZ7 208 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 ITLN2Q8WWU7 325 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 RND1Q92730 232 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 PROX1Q92786 737 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 WNT2BQ93097 391 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 FAM162AQ96A26 154 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 CLPTM1LQ96KA5 538 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 SRXN1Q9BYN0 137 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 TMEM27Q9HBJ8 222 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 DCAF13Q9NV06 445 aaKnown RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 Q9UFV3 132 aa16.98■□□□□ 0.31
LMNB1-204ENST00000463908 UTP20O75691 2785 aaKnown RBP16.98■□□□□ 0.31
LMNB1-204ENST00000463908 A0A0B4J2E0 115 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 A0A1B0GX12 115 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 LYPD3O95274 346 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 FKBP2P26885 142 aaKnown RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 CLK1P49759 484 aaKnown RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 MAP2K6P52564 334 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 CDH12P55289 794 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 PER3P56645 1201 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 MS4A2Q01362 244 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 PON3Q15166 354 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 ENTPD8Q5MY95 495 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 RIPPLY2Q5TAB7 128 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 ULK3Q6PHR2 472 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 TMPPEQ6ZT21 453 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 MRGPRGQ86SM5 289 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 RANBP3LQ86VV4 465 aaPredicted RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 FNDC9Q8TBE3 224 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 SSC4DQ8WTU2 575 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 SLC25A43Q8WUT9 341 aaPredicted RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 SLC38A4Q969I6 547 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 DNAJA3Q96EY1 480 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 OR5B2Q96R09 309 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 BTBD10Q9BSF8 475 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 ADPRHL2Q9NX46 363 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 PRPF19Q9UMS4 504 aaKnown RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 RNF6Q9Y252 685 aa16.97■□□□□ 0.31
LMNB1-204ENST00000463908 SPTAN1Q13813 2472 aaKnown RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 USP9YO00507 2555 aaPredicted RBP16.97■□□□□ 0.31
LMNB1-204ENST00000463908 SLC22A20A6NK97 555 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 ARPC2O15144 300 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 NPIPB7O75200 414 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 PDE5AO76074 875 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 AQP8O94778 261 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 RCBTB2O95199 551 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 ZNF682O95780 498 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 TFPIP10646 304 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms