RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 LSMEM2Q8N112 164 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 OR5D14Q8NGL3 314 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 CCDC74BQ96LY2 380 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 ANKRD60Q9BZ19 345 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 COQ3Q9NZJ6 369 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 ARAP2Q8WZ64 1704 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 NPPBP16860 134 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 S100A1P23297 94 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 L3MBTL4Q8NA19 623 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 B3GNT7Q8NFL0 401 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 OR11L1Q8NGX0 322 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 TBC1D15Q8TC07 691 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 ST6GALNAC5Q9BVH7 336 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 C20orf27Q9GZN8 174 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 DDX31Q9H8H2 851 aaKnown RBP11.92□□□□□ -0.5
NUP58-206ENST00000463407 MAN2C1Q9NTJ4 1040 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 DECR2Q9NUI1 292 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 FURINP09958 794 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 PDE7AQ13946 482 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 YOD1Q5VVQ6 348 aaPredicted RBP11.92□□□□□ -0.5
NUP58-206ENST00000463407 ABHD17CQ6PCB6 329 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 SBSNQ6UWP8 590 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 SYT13Q7L8C5 426 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
NUP58-206ENST00000463407 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
NUP58-206ENST00000463407 ZNF285Q96NJ3 590 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 MICU1Q9BPX6 476 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 IFNA5P01569 189 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 NUDT7P0C024 238 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 ADARB1P78563 741 aaKnown RBP11.92□□□□□ -0.5
NUP58-206ENST00000463407 DEFA5Q01523 94 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 SPEM2Q0P670 501 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 GPR50Q13585 617 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 OR8J2Q8NGG1 315 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 OR1J2Q8NGS2 313 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 CCL4L1Q8NHW4 92 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 SLC41A2Q96JW4 573 aa11.92□□□□□ -0.5
NUP58-206ENST00000463407 ZDHHC11BP0C7U3 371 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 OR1N1Q8NGS0 311 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TXNDC15Q96J42 360 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 RHBDD3Q9Y3P4 386 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 PAPPAQ13219 1627 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TRAV18A0A075B6X5 111 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 ITGAMP11215 1152 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 MTHFD2P13995 350 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TMEM163Q8TC26 289 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TREX2Q9BQ50 279 aaPredicted RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 DEFB127Q9H1M4 99 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 ARAFP10398 606 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 CHMP24386 653 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 ERVK-16P61578 105 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TMEM244Q5VVB8 128 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 PLAG1Q6DJT9 500 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 SLC48A1Q6P1K1 146 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 Q6ZNB5 142 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 SLC29A1Q99808 456 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 CPPED1Q9BRF8 314 aaPredicted RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 ATG4BQ9Y4P1 393 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 HLA-BQ31612 363 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 SLC36A2Q495M3 483 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 AGAP7PQ5VUJ5 663 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 ZBTB8BQ8NAP8 495 aaPredicted RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 OR5M1Q8NGP8 315 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 AGAP4Q96P64 663 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 CDX2Q99626 313 aaPredicted RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 GLIPR2Q9H4G4 154 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 SYNPO2LQ9H987 977 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TARM1B6A8C7 271 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 TRAPPC2LH3BP13 241 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 GNAO1P09471 354 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 RNASE10Q5GAN6 216 aaKnown RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 Q7L0L9 218 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 MEPCEQ7L2J0 689 aaKnown RBP11.91□□□□□ -0.5
NUP58-206ENST00000463407 IL17RDQ8NFM7 739 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 PHOX2BQ99453 314 aa11.91□□□□□ -0.5
NUP58-206ENST00000463407 LOC105369274A0A096LPK9 316 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 TMEM269A0A1B0GVZ9 245 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 TCRBV3S1A0A5B6 114 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 EDN3P14138 238 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 ZNF44P15621 663 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 TACR1P25103 407 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 EIF1P41567 113 aaKnown RBP11.9□□□□□ -0.5
NUP58-206ENST00000463407 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 OR4N4Q8N0Y3 316 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 NDNFQ8TB73 568 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 NRSN2Q9GZP1 204 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 B3GNT2Q9NY97 397 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 ZNF587BE7ETH6 402 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 WNT11O96014 354 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 MYF5P13349 255 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 GLB1P16278 677 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 ATP1B3P54709 279 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 TBRG1Q3YBR2 411 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 SLC6A19Q695T7 634 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms