RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ZNF823P16415 610 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 CTXN1P60606 82 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 SIRPAP78324 504 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 GRK1Q15835 563 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 KLHL26Q53HC5 615 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 TMEM215Q68D42 235 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 CSNK1A1LQ8N752 337 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 CNOT9Q92600 299 aaKnown RBP13.42□□□□□ -0.26
NCL-207ENST00000461347 AHCYL2Q96HN2 611 aaKnown RBP13.42□□□□□ -0.26
NCL-207ENST00000461347 SLC38A1Q9H2H9 487 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
NCL-207ENST00000461347 GOSR2O14653 212 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ZNF628Q5EBL2 1059 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ZNF542PQ5EBM4 170 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 TOR2AQ5JU69 321 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 FAM69AQ5T7M9 428 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 KCTD9Q7L273 389 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 GALNTL5Q7Z4T8 443 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 TSEN54Q7Z6J9 526 aaKnown RBP13.41□□□□□ -0.26
NCL-207ENST00000461347 INO80EQ8NBZ0 244 aaPredicted RBP13.41□□□□□ -0.26
NCL-207ENST00000461347 OR5AK2Q8NH90 309 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 GPER1Q99527 375 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 NOX4Q9NPH5 578 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 IFT46Q9NQC8 304 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 STARD5Q9NSY2 213 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 GPR55Q9Y2T6 319 aaPredicted RBP13.41□□□□□ -0.26
NCL-207ENST00000461347 C13orf42A0A1B0GVH6 325 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 SCDO00767 359 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 NARSO43776 548 aaKnown RBP13.41□□□□□ -0.26
NCL-207ENST00000461347 PPM1BO75688 479 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 AK1P00568 194 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 RAF1P04049 648 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 SPARCP09486 303 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 F3P13726 295 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 CPMP14384 443 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 OPRD1P41143 372 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 SLC25A35Q3KQZ1 300 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 SIGIRRQ6IA17 410 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 NIPAL3Q6P499 406 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ZNF836Q6ZNA1 936 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 OR5J2Q8NH18 312 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 PRDM9Q9NQV7 894 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 KCMF1Q9P0J7 381 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 MYEF2Q9P2K5 600 aaKnown RBP13.41□□□□□ -0.26
NCL-207ENST00000461347 SCN3AQ9NY46 2000 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 GREB1Q4ZG55 1949 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ACOT7O00154 380 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 PEX12O00623 359 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 OR8G3PP0DMU2 310 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 HOXB2P14652 356 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 CCKBRP32239 447 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 GLYR1Q49A26 553 aaPredicted RBP13.41□□□□□ -0.26
NCL-207ENST00000461347 HACD4Q5VWC8 232 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 RAB12Q6IQ22 244 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 BEST3Q8N1M1 668 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 SMARCD2Q92925 531 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ORAI1Q96D31 301 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 S100A13Q99584 98 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 OR8D2Q9GZM6 311 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ZBP1Q9H171 429 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ANKRD19PQ9H560 264 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 FLVCR2Q9UPI3 526 aa13.41□□□□□ -0.26
NCL-207ENST00000461347 ADH1BP00325 375 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 LALBAP00709 142 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 GNRH1P01148 92 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 CLUP10909 449 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 NPR2P20594 1047 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 SOX9P48436 509 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 TRMT12Q53H54 448 aaKnown RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 BOLLQ8N9W6 283 aaKnown RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 OR2L8Q8NGY9 312 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 SERINC2Q96SA4 455 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 SDHCQ99643 169 aaPredicted RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 GPA33Q99795 319 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 SIRT3Q9NTG7 399 aaPredicted RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 SPHK1Q9NYA1 384 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 MRTO4Q9UKD2 239 aaKnown RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 NPFFR2Q9Y5X5 522 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 HYAL3O43820 417 aaPredicted RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 CYB5AP00167 134 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 AGERQ15109 404 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 DGLUCYQ7Z3D6 616 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 GSX2Q9BZM3 304 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 B3GAT2Q9NPZ5 323 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 COPS3Q9UNS2 423 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 NAP1L6A6NFF2 107 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 B4DGG1 531 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
NCL-207ENST00000461347 HNRNPA1P09651 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
NCL-207ENST00000461347 IL12BP29460 328 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 KIAA1024LP59773 190 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 MAPK14Q16539 360 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 GFOD2Q3B7J2 385 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 OR7G2Q8NG99 324 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 THAP6Q8TBB0 222 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 NMNAT3Q96T66 252 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 MARVELD1Q9BSK0 173 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms