RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 PMP22Q01453 160 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CFHR3Q02985 330 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 FOXM1Q08050 763 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CEACAM7Q14002 265 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CAPRIN1Q14444 709 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 HEPACAMQ14CZ8 416 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CEBPEQ15744 281 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 HSPB2Q16082 182 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 MLANAQ16655 118 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CLPPQ16740 277 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PNLIPRP3Q17RR3 467 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TRMT5Q32P41 509 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 DEFB134Q4QY38 66 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZNF385BQ569K4 471 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PIGGQ5H8A4 983 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TCTE1Q5JU00 501 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NDUFAF5Q5TEU4 345 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ANXA8L1Q5VT79 327 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR4F3Q6IEY1 312 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NANOGP8Q6NSW7 305 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRMT9Q6P2P2 845 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 WDR88Q6ZMY6 472 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 Q6ZWC4 215 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CBLL1Q75N03 491 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ABHD13Q7L211 337 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRSS42Q7Z5A4 293 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ARHGAP22Q7Z5H3 698 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 DHDDSQ86SQ9 333 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 GPR180Q86V85 440 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ANKRD46Q86W74 232 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 KMT5CQ86Y97 462 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PM20D2Q8IYS1 436 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ARHGAP24Q8N264 748 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 FAM47BQ8NA70 645 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRSS33Q8NF86 280 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 GJC3Q8NFK1 279 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 OR4D9Q8NGE8 314 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ATOH1Q92858 354 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 UCN3Q969E3 161 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 MCUR1Q96AQ8 359 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NACC2Q96BF6 587 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PPCDCQ96CD2 204 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 MBD6Q96DN6 1003 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ITCHQ96J02 903 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CCDC115Q96NT0 180 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SEPHS2Q99611 448 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CGREF1Q99674 301 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRRX2Q99811 253 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SSX3Q99909 188 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CCDC3Q9BQI4 270 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SLC39A3Q9BRY0 314 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PCGF1Q9BSM1 259 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 DUSP26Q9BV47 211 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ALOXE3Q9BYJ1 711 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NLNQ9BYT8 704 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SPRTNQ9H040 489 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PIGMQ9H3S5 423 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 RMND5AQ9H871 391 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NANOGQ9H9S0 305 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SERINC1Q9NRX5 453 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 FAM120CQ9NX05 1096 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CMTM6Q9NX76 183 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TEX10Q9NXF1 929 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TAS2R7Q9NYW3 318 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ADA2Q9NZK5 511 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 TMEM181Q9P2C4 612 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 KCNN3Q9UGI6 736 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CD300AQ9UGN4 299 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 CES1P1Q9UKY3 287 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PRPF19Q9UMS4 504 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 PLEKHA6Q9Y2H5 1048 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 MRPS2Q9Y399 296 aaKnown RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 NAALAD2Q9Y3Q0 740 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 ATG4BQ9Y4P1 393 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SIRT4Q9Y6E7 314 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 U3KQV3 271 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 SPTBN4Q9H254 2564 aa4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 COL5A1P20908 1838 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P4-201ENST00000455362 A0A0B4J203 849 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 IGHV5-10-1A0A0J9YXX1 117 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 HYKKA2RU49 373 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 H3BMH7 237 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 RNASET2O00584 256 aaKnown RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 NTN3O00634 580 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 NME4O00746 187 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 RFXANKO14593 260 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 MAGEB3O15480 346 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 FLRT2O43155 660 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 FOXS1O43638 330 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 GALR3O60755 368 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 NME6O75414 186 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 PDE5AO76074 875 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 SORBS2O94875 1100 aaKnown RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 GLCEO94923 617 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 CPSF4O95639 269 aaKnown RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 ANKRD34CP0C6C1 535 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 FOLR1P15328 257 aa4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 EFNA1P20827 205 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 ZNF10P21506 573 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P4-201ENST00000455362 ACP1P24666 158 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms