RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 VMACQ2NL98 169 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 GLIPR1L2Q4G1C9 344 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FAM91A1Q658Y4 838 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 ABLIM2Q6H8Q1 611 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 WBP2NLQ6ICG8 309 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 C6orf89Q6UWU4 347 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 CCDC80Q76M96 950 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 OSTF1Q92882 214 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
HDAC4-205ENST00000454542 C3orf49Q96BT1 292 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 STARD4Q96DR4 205 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 GMPPAQ96IJ6 420 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 EVA1AQ9H8M9 152 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 GP6Q9HCN6 339 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 GID8Q9NWU2 228 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FOXD3Q9UJU5 478 aaPredicted RBP12.67□□□□□ -0.38
HDAC4-205ENST00000454542 HDGFL3Q9Y3E1 203 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 CELSR2Q9HCU4 2923 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TMED7-TICAM2A0A0A6YYA0 188 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TMEM72A0PK05 275 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 MSTNO14793 375 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 SMAD9O15198 467 aaKnown RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 SHOX2O60902 331 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 SYNGR4O95473 234 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 PMS2P2O95744 297 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 CD8BP10966 210 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 COX6B1P14854 86 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 CD247P20963 164 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 HTR2AP28223 471 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 AQP1P29972 269 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 AGFG1P52594 562 aaKnown RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 CARD18P57730 90 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 SORDQ00796 357 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 VEZF1Q14119 521 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 ERICH5Q6P6B1 374 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TMPPEQ6ZT21 453 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 FAM214BQ7L5A3 538 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 ATG4DQ86TL0 474 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 LSMEM1Q8N8F7 131 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 GPR32P1Q8NGA4 272 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TAMM41Q96BW9 452 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 ARL5BQ96KC2 179 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF583Q96ND8 569 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 OR5B2Q96R09 309 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 ARHGDIGQ99819 225 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 C12orf10Q9HB07 376 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 ING1Q9UK53 422 aaPredicted RBP12.66□□□□□ -0.38
HDAC4-205ENST00000454542 TMED7Q9Y3B3 224 aa12.66□□□□□ -0.38
HDAC4-205ENST00000454542 A8MXE2 369 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 EEF1E1-BLOC1S5C9J1V9 151 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 EEF1E1O43324 174 aaKnown RBP12.65□□□□□ -0.38
HDAC4-205ENST00000454542 NPIPB7O75200 414 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 SERPINB7O75635 380 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 AGTR1P30556 359 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 PEX19P40855 299 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 KCNJ5P48544 419 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 DIO1P49895 249 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 MYBPHQ13203 477 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 RNPS1Q15287 305 aaKnown RBP12.65□□□□□ -0.38
HDAC4-205ENST00000454542 NRF1Q16656 503 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 INTS11Q5TA45 600 aaKnown RBP12.65□□□□□ -0.38
HDAC4-205ENST00000454542 MEX3BQ6ZN04 569 aaKnown RBP12.65□□□□□ -0.38
HDAC4-205ENST00000454542 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ARMC8Q8IUR7 673 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 WFDC6Q9BQY6 131 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 BCO1Q9HAY6 547 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 CMTM6Q9NX76 183 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ABCD2Q9UBJ2 740 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 USP22Q9UPT9 525 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ARL2BPQ9Y2Y0 163 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ANKHD1Q8IWZ3 2542 aaKnown RBP12.65□□□□□ -0.38
HDAC4-205ENST00000454542 ZC3H12DA2A288 527 aaKnown RBP12.64□□□□□ -0.39
HDAC4-205ENST00000454542 TPST2O60704 377 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 CYTIPO60759 359 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 LGI1O95970 557 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 OPN1SWP03999 348 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 FESP07332 822 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 C8BP07358 591 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 IMPDH2P12268 514 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 PRF1P14222 555 aa12.64□□□□□ -0.39
HDAC4-205ENST00000454542 KLK2P20151 261 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms