RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ALG8Q9BVK2 526 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 SMURF1Q9HCE7 757 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 LOC110117498-PIK3R3F6TDL0 507 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 DVL2O14641 736 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 AKAP8O43823 692 aaKnown RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 UPK1BO75841 260 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 CFIP05156 583 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 UBL4AP11441 157 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 HIST1H1CP16403 213 aaKnown RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 ENDOUP21128 410 aaKnown RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 GPLD1P80108 840 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 KLHL26Q53HC5 615 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 RPL13AP3Q6NVV1 102 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 GDPGP1Q6ZNW5 385 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 C16orf47Q6ZP98 133 aaPredicted RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 OR8H2Q8N162 312 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ATP6V1C2Q8NEY4 427 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ZMYND19Q96E35 227 aaPredicted RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 PELOQ9BRX2 385 aaKnown RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 RTN4RQ9BZR6 473 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 NXF2Q9GZY0 626 aaKnown RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 SLC35A3Q9Y2D2 325 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 CASKO14936 926 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 HCRTR2O43614 444 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ICOSLGO75144 302 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 NCR1O76036 304 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 DDAH2O95865 285 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 PEPDP12955 493 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 HK1P19367 917 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 IL12BP29460 328 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 SLC6A6P31641 620 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 PPICP45877 212 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 TPBGQ13641 420 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 OXA1LQ15070 435 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF322Q6U7Q0 402 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 LYSMD2Q8IV50 215 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF527Q8NB42 609 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 C3orf49Q96BT1 292 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF524Q96C55 264 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 LCORQ96JN0 433 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 SLC46A1Q96NT5 459 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 MROQ9BYG7 248 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 VN1R1Q9GZP7 353 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 CRNNQ9UBG3 495 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 EXOGQ9Y2C4 368 aaKnown RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 A0A1B0GX78 115 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 FAM171A2A8MVW0 826 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 J3QLW9 94 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 SNX4O95219 450 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 MSL3P1P0C860 447 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF19P17023 458 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 NAA10P41227 235 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 GPR143P51810 404 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 CARTPTQ16568 116 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZMAT1Q5H9K5 638 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 MARCH9Q86YJ5 346 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF721Q8TF20 911 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF501Q96CX3 271 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 GUCD1Q96NT3 240 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 OR1F2PQ96R84 312 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 SLC30A2Q9BRI3 323 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF426Q9BUY5 554 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 GSTK1Q9Y2Q3 226 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 SF3B6Q9Y3B4 125 aaKnown RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 A0A087WUJ7 227 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 EFCAB7A8K855 629 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 DLGAP3O95886 979 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 GABRA5P31644 462 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ERVK-25P63136 954 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF45Q02386 682 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ELAVL1Q15717 326 aaKnown RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 ARL9Q6T311 187 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 RPTNQ6XPR3 784 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 TMPRSS11AQ6ZMR5 421 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 PLEKHG7Q6ZR37 379 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 MARCH3Q86UD3 253 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 C9orf40Q8IXQ3 194 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 OR7G1Q8NGA0 311 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 MAFAQ8NHW3 353 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 KISS1RQ969F8 398 aaPredicted RBP10.79□□□□□ -0.68
VTA1-203ENST00000452973 SLC41A2Q96JW4 573 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 OR6C1Q96RD1 312 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 NMNAT3Q96T66 252 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 ZNF649Q9BS31 505 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 COPS7AQ9UBW8 275 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 MMACHCQ9Y4U1 282 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 PCDHGB6Q9Y5F9 930 aa10.79□□□□□ -0.68
VTA1-203ENST00000452973 C4orf47A7E2U8 309 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 TAF4O00268 1085 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 ZNF264O43296 627 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 NDUFB2O95178 105 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 IGHA1P01876 353 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 RBM34P42696 430 aaKnown RBP10.78□□□□□ -0.68
VTA1-203ENST00000452973 BCAP31P51572 246 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 FHL1Q13642 323 aa10.78□□□□□ -0.68
VTA1-203ENST00000452973 ZNF574Q6ZN55 896 aaPredicted RBP10.78□□□□□ -0.68
VTA1-203ENST00000452973 SLC38A9Q8NBW4 561 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms