RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TXNDC5Q8NBS9 432 aaKnown RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 SLC37A3Q8NCC5 494 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 FBXL8Q96CD0 374 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 DCAF5Q96JK2 942 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 ZIM3Q96PE6 472 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 SDHCQ99643 169 aaPredicted RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 COPS4Q9BT78 406 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 TRABDQ9H4I3 376 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 ACTL8Q9H568 366 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 DLL4Q9NR61 685 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 C1orf109Q9NX04 203 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 DUSP13Q9UII6 198 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 BTNL2Q9UIR0 455 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 CPQQ9Y646 472 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 hCG_38984A0A1B0GV85 526 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 SSU72P8A0A1W2PR75 194 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 SP9P0CG40 484 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 RABGGTBP53611 331 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 RAG2P55895 527 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 MRPS22P82650 360 aaKnown RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 ARL6IP1Q15041 203 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 PTGES3Q15185 160 aaKnown RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 PLK5Q496M5 336 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 PTPN20Q4JDL3 420 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 SYT14P1Q58G82 188 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 FAM69BQ5VUD6 431 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 HIST2H2AA3Q6FI13 130 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 DRAM2Q6UX65 266 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 DLK2Q6UY11 383 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 TRMT1LQ7Z2T5 733 aaKnown RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 SATL1Q86VE3 508 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 PGAM4Q8N0Y7 254 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 LRRC52Q8N7C0 313 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 OR1M1Q8NGA1 313 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 OR9A4Q8NGU2 314 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 BADQ92934 168 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 GTPBP3Q969Y2 492 aaKnown RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 DEFB118Q96PH6 123 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 TIPINQ9BVW5 301 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 OR51M1Q9H341 326 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 KAT8Q9H7Z6 458 aaKnown RBP3.55□□□□□ -1.84
UBR3-206ENST00000444475 POLE4Q9NR33 117 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 ASB6Q9NWX5 421 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 KCNG2Q9UJ96 466 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 MTCH2Q9Y6C9 303 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 SCAPERQ9BY12 1400 aa3.55□□□□□ -1.84
UBR3-206ENST00000444475 ADGRA2Q96PE1 1338 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 ATP6AP2A0A1C7CYW4 349 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 E7ENX8 843 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 TFECO14948 347 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 SLC31A1O15431 190 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 MAGEB4O15481 346 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 NUPL2O15504 423 aaKnown RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 ARPC5O15511 151 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 KLRC4O43908 158 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 RCBTB2O95199 551 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 CD74P04233 296 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 CD5P06127 495 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 EFNA1P20827 205 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 GPX4P36969 197 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 ZNF84P51523 738 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 NUDT6P53370 316 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 MRPS11P82912 194 aaKnown RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 EWSR1Q01844 656 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBR3-206ENST00000444475 CRYZQ08257 329 aaKnown RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 KLRB1Q12918 225 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 PXDC1Q5TGL8 231 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 SETD3Q86TU7 594 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 ZNF761Q86XN6 746 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 BBS7Q8IWZ6 715 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 TMEM251Q8N6I4 163 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 OR1J2Q8NGS2 313 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 YIPF5Q969M3 257 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 TMEM56Q96MV1 263 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 LGMNQ99538 433 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 TTYH2Q9BSA4 534 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 GATA5Q9BWX5 397 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 HCAR1Q9BXC0 346 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 RAB11FIP5Q9BXF6 653 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 PARD6AQ9NPB6 346 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 CTPS2Q9NRF8 586 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 ABHD10Q9NUJ1 306 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 GID8Q9NWU2 228 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 IKZF2Q9UKS7 526 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 CDH10Q9Y6N8 788 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 TMEM56-RWDD3S4R434 201 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 ADGRB2O60241 1585 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 SHANK3Q9BYB0 1731 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 RGPD3A6NKT7 1758 aaPredicted RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 RGPD4Q7Z3J3 1758 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 MARF1Q9Y4F3 1742 aaKnown RBP3.54□□□□□ -1.84
UBR3-206ENST00000444475 A0A1W2PQJ5 194 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 EFCAB7A8K855 629 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 M0QZK8 103 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 PRYO14603 147 aa3.54□□□□□ -1.84
UBR3-206ENST00000444475 ZNF749O43361 778 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms