RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GCM2O75603 506 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 GRNP28799 593 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TACR3P29371 465 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 AQP1P29972 269 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 PEX19P40855 299 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 ASCL1P50553 236 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 CSNK2A1P68400 391 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 DMTNQ08495 405 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 GUSBP1Q15486 140 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 ZNF239Q16600 458 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 PLXDC2Q6UX71 529 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TMPPEQ6ZT21 453 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 SLC15A3Q8IY34 581 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 SLC43A2Q8N370 569 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 ATP6V1C2Q8NEY4 427 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 DDIT4LQ96D03 193 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 GMPPAQ96IJ6 420 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 RSPO3Q9BXY4 272 aaPredicted RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 ENKD1Q9H0I2 346 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 C12orf10Q9HB07 376 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 GP6Q9HCN6 339 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TESQ9UGI8 421 aaKnown RBP13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 SLC13A4Q9UKG4 626 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TMED7Q9Y3B3 224 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 A0A1W2PNV4 684 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 DNPH1O43598 174 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 TNFSF13O75888 250 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 AQP8O94778 261 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 PMS2P2O95744 297 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 IFNA14P01570 189 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 PRG2P13727 222 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 IGFBP2P18065 325 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 CXCR1P25024 350 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 KCNJ5P48544 419 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 NUDT2P50583 147 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 FOXF2Q12947 444 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 RNPS1Q15287 305 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 GCNT2Q8N0V5 402 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 CADM2Q8N3J6 435 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 OR2T12Q8NG77 320 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 SLC26A7Q8TE54 656 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 RNF128Q8TEB7 428 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 OR5B2Q96R09 309 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 SPOCK3Q9BQ16 436 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 SRXN1Q9BYN0 137 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 POTEKPQ9BYX7 375 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 TRIM2Q9C040 744 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 CMTM6Q9NX76 183 aa13.46□□□□□ -0.25
CSNK1E-210ENST00000442216 A0A1W2PNR3 127 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 TMEM72A0PK05 275 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 ELOVL7A1L3X0 281 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 C19orf84I3L1E1 186 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 SULT2B1O00204 365 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 SS18L1O75177 396 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 LGI1O95970 557 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 TFPIP10646 304 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 COL8A1P27658 744 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 KIR2DL2P43627 348 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 PCYT1AP49585 367 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 DIO1P49895 249 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 RGS8P57771 180 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 NRF1Q16656 503 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 DUSP7Q16829 419 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 FCRLAQ7L513 359 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 FAM214BQ7L5A3 538 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 RANBP3LQ86VV4 465 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 MICU2Q8IYU8 434 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 CCDC197Q8NCU1 140 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 DNAJA4Q8WW22 397 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 ARHGDIGQ99819 225 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 ZNF559Q9BR84 538 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 TACO1Q9BSH4 297 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 PIF1Q9H611 641 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC24A3Q9HC58 644 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 ABCD2Q9UBJ2 740 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 RPS6KB2Q9UBS0 482 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 TAGLN3Q9UI15 199 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 PACSIN3Q9UKS6 424 aa13.45□□□□□ -0.26
CSNK1E-210ENST00000442216 HECTD1Q9ULT8 2610 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 CCT8L1PA6NM43 557 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 MSTNO14793 375 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 FRS3O43559 492 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 FMO6PO60774 539 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 PLGP00747 810 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 OPN1SWP03999 348 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 CD8BP10966 210 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 CD247P20963 164 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 ENPP1P22413 925 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC7A2P52569 658 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 AGFG1P52594 562 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 NCALDP61601 193 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 MYBPHQ13203 477 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 PPP4R4Q6NUP7 873 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
CSNK1E-210ENST00000442216 ATG4DQ86TL0 474 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms