RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ZNF321PQ8N8H1 164 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 C17orf47Q8NEP4 570 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 SDR9C7Q8NEX9 313 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ZMYND19Q96E35 227 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 MMABQ96EY8 250 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 TIMP4Q99727 224 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ZNF350Q9GZX5 532 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ENTPD2Q9Y5L3 495 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 DAPL1A0PJW8 107 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 CSF3P09919 207 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 SLC2A2P11168 524 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 NAA10P41227 235 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 MRPS15P82914 257 aaKnown RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 RANBP3LQ86VV4 465 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 C1orf216Q8TAB5 229 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 UBASH3BQ8TF42 649 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 PIGKQ92643 395 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 RIT1Q92963 219 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 HS6ST2Q96MM7 605 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 TEAD3Q99594 435 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 UQCC2Q9BRT2 126 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 NRSN2Q9GZP1 204 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 SRRQ9GZT4 340 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 C11orf54Q9H0W9 315 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 SEMA6CQ9H3T2 930 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 KLHL1Q9NR64 748 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 FRYQ5TBA9 3013 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 A0A1B0GWA3 101 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ISPDA4D126 451 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ANKRD61A6NGH8 418 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 KDM4EB2RXH2 506 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 KLF4O43474 513 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 STAT5AP42229 794 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 TSFMP43897 325 aaKnown RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 CAPZBP47756 277 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 OR1D4P47884 311 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 CCR4P51679 360 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 DEFA1P59665 94 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 DEFA3P59666 94 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 POU6F2P78424 691 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 BNC1Q01954 994 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 IL18Q14116 193 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 TUBA3EQ6PEY2 450 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ASB18Q6ZVZ8 466 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 RNF44Q7L0R7 432 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 PRR22Q8IZ63 422 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ZNF485Q8NCK3 441 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.72□□□□□ -1.01
CUX1-206ENST00000437600 ZNF524Q96C55 264 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 TSSK2Q96PF2 358 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 SP140LQ9H930 580 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ANKHQ9HCJ1 492 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 ERVK-19Q9WJR5 959 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 UGT2A1Q9Y4X1 527 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 CDH10Q9Y6N8 788 aa8.72□□□□□ -1.01
CUX1-206ENST00000437600 A0A075B6Q4 140 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 IDSB3KWA1 339 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 CDK2AP1O14519 115 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 BCAT2O15382 392 aaPredicted RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 ZNF254O75437 659 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 OR5F1O95221 314 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 PYCR1P32322 319 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 TPBGQ13641 420 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.011e-6■■■■■ 31.5
CUX1-206ENST00000437600 ALG10BQ5I7T1 473 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 CNIH2Q6PI25 160 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 ZNF322Q6U7Q0 402 aaPredicted RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 PRR23CQ6ZRP0 262 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 GKN2Q86XP6 184 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 ZNF655Q8N720 491 aaPredicted RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 CDRT4Q8N9R6 151 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 OR52E2Q8NGJ4 325 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 ALG8Q9BVK2 526 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 SPRTNQ9H040 489 aaPredicted RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 FGF20Q9NP95 211 aaPredicted RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 DHCR7Q9UBM7 475 aaKnown RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 SATB2Q9UPW6 733 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 MRPS7Q9Y2R9 242 aaKnown RBP8.71□□□□□ -1.01
CUX1-206ENST00000437600 OTOGLQ3ZCN5 2332 aa8.71□□□□□ -1.01
CUX1-206ENST00000437600 A0A1W2PRG6 482 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 SNTNA6NMZ2 147 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 RHPN2P1A8MT19 583 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 BHLHE40O14503 412 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 BRINP1O60477 761 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 ATP1B1P05026 303 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 PRKCAP17252 672 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 S1PR1P21453 382 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 ZNF10P21506 573 aaPredicted RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 RPS27P42677 84 aaKnown RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 CDC20Q12834 499 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 TP53I3Q53FA7 332 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 SHISA6Q6ZSJ9 500 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 BMP8AQ7Z5Y6 402 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 KLHL36Q8N4N3 616 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 OR52L1Q8NGH7 329 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 ZPLD1Q8TCW7 415 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 RFKQ969G6 155 aa8.71□□□□□ -1.02
CUX1-206ENST00000437600 AHCYL2Q96HN2 611 aaKnown RBP8.71□□□□□ -1.02
CUX1-206ENST00000437600 C4orf36Q96KX1 117 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms