RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TMEM19Q96HH6 336 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 RLIMQ9NVW2 624 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 EMC3Q9P0I2 261 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-205ENST00000427897 DCTN4Q9UJW0 460 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 TMED7Q9Y3B3 224 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 EVPLLA8MZ36 301 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 CYTIPO60759 359 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 RPS4Y1P22090 263 aaKnown RBP18.39■□□□□ 0.53
HSPG2-205ENST00000427897 IL32P24001 234 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 TACR3P29371 465 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 SLC1A3P43003 542 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ATP4BP51164 291 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 MVDP53602 400 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 FADDQ13158 208 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF311Q5JNZ3 666 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 PAMR1Q6UXH9 720 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 MTDHQ86UE4 582 aaKnown RBP18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ADGRG3Q86Y34 549 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 WFDC8Q8IUA0 241 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 FUNDC1Q8IVP5 155 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF100Q8IYN0 542 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 STEAP2Q8NFT2 490 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 STON2Q8WXE9 905 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 FOXC2Q99958 501 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ACTR6Q9GZN1 396 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 NPHS2Q9NP85 383 aa18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF443Q9Y2A4 671 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-205ENST00000427897 ANKRD17O75179 2603 aaKnown RBP18.38■□□□□ 0.53
HSPG2-205ENST00000427897 SMAD9O15198 467 aaKnown RBP18.38■□□□□ 0.53
HSPG2-205ENST00000427897 PMS2P2O95744 297 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 THBS1P07996 1170 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 GKN3PP0CG01 181 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 CCKARP32238 428 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 EPS8Q12929 822 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 SPNS3Q6ZMD2 512 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF836Q6ZNA1 936 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 CXorf67Q86X51 503 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-205ENST00000427897 PSD2Q9BQI7 771 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 NAA11Q9BSU3 229 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-205ENST00000427897 OR11A1Q9GZK7 315 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 PLEKHF2Q9H8W4 249 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 BCO1Q9HAY6 547 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 FGFR1OP2Q9NVK5 253 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 TMEM45AQ9NWC5 275 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 TMEM181Q9P2C4 612 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 OSGIN1Q9UJX0 560 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 CORO2BQ9UQ03 480 aa18.38■□□□□ 0.53
HSPG2-205ENST00000427897 CDHR4A6H8M9 788 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 FAAHO00519 579 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 ADAP00813 363 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 MAP2K6P52564 334 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 TESK1Q15569 626 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 TFAP2EQ6VUC0 442 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 GALNT5Q7Z7M9 940 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 KRT73Q86Y46 540 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 UBE2J2Q8N2K1 259 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 BBS10Q8TAM1 723 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 PIGXQ8TBF5 258 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 KISS1RQ969F8 398 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-205ENST00000427897 ARL5BQ96KC2 179 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF300Q96RE9 604 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-205ENST00000427897 SPATA9Q9BWV2 254 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 UBTD1Q9HAC8 227 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 A4GALTQ9NPC4 353 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 FAM53CQ9NYF3 392 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 PRDM4Q9UKN5 801 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 TRAPPC4Q9Y296 219 aa18.37■□□□□ 0.53
HSPG2-205ENST00000427897 NOSIPQ9Y314 301 aaKnown RBP18.37■□□□□ 0.53
HSPG2-205ENST00000427897 CSMD1Q96PZ7 3565 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 A0A0G2JND7 137 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 A0A1W2PP18 115 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF724A8MTY0 619 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 GPR171O14626 319 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 ZNF208O43345 1280 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 DNPH1O43598 174 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 ADAM11O75078 769 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 PSMB1P20618 241 aaKnown RBP18.36■□□□□ 0.53
HSPG2-205ENST00000427897 SLC35A1P78382 337 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 CAPRIN1Q14444 709 aaKnown RBP18.36■□□□□ 0.53
HSPG2-205ENST00000427897 MAPK11Q15759 364 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 BEX5Q5H9J7 111 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 PAGE3Q5JUK9 113 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 LRIF1Q5T3J3 769 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 SFRP5Q5T4F7 317 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 GCNT6Q5T4J0 391 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 WBP2NLQ6ICG8 309 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 MAL2Q969L2 176 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 SPATA5L1Q9BVQ7 753 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 OR10A4Q9H209 315 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 NGBQ9NPG2 151 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 DSPPQ9NZW4 1301 aa18.36■□□□□ 0.53
HSPG2-205ENST00000427897 LEF1Q9UJU2 399 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-205ENST00000427897 TMEM72A0PK05 275 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 ANGPT2O15123 496 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 EIF1BO60739 113 aaKnown RBP18.35■□□□□ 0.53
HSPG2-205ENST00000427897 NUDT7P0C024 238 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 OR3A2P47893 321 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 P2RY6Q15077 328 aa18.35■□□□□ 0.53
HSPG2-205ENST00000427897 DEFB113Q30KQ7 82 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms