RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 COLEC10Q9Y6Z7 277 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 HK1P19367 917 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 RAB3BP20337 219 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 CDK5Q00535 292 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 DCST2Q5T1A1 773 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ZNF620Q6ZNG0 422 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 OOSP2Q86WS3 158 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ABCA7Q8IZY2 2146 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 OR1E3Q8WZA6 343 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 TSPAN10Q9H1Z9 355 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 TCEAL2Q9H3H9 227 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 CD207Q9UJ71 328 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 FRYLO94915 3013 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 MPDZO75970 2070 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 A0A0A6YYD5 115 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 ZNF3P17036 446 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 PITPNBP48739 271 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 RRAS2P62070 204 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 MFSD12Q6NUT3 480 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 FIGLAQ6QHK4 219 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 GDPGP1Q6ZNW5 385 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 ABHD4Q8TB40 342 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 TEAD3Q99594 435 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 SEC22CQ9BRL7 303 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 APOOQ9BUR5 198 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 PELI2Q9HAT8 420 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 DUXAA6NLW8 204 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 C10orf142B7Z368 130 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 KLF8O95600 359 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 DNASE1P24855 282 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 DDOSTP39656 456 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 FNTBP49356 437 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 RAB14P61106 215 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 GLYR1Q49A26 553 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 ZNF776Q68DI1 518 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 TMEM91Q6ZNR0 172 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 RTL4Q6ZR62 310 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 SRFBP1Q8NEF9 429 aaKnown RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 OR52R1Q8NGF1 315 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 THAP4Q8WY91 577 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 SNX18Q96RF0 628 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 SDF2Q99470 211 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 METTL17Q9H7H0 456 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 ACOXLQ9NUZ1 547 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 PIAS3Q9Y6X2 628 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 A3GALT2U3KPV4 340 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 SVILO95425 2214 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 C17orf51A8MQB3 221 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 STX11O75558 287 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 THY1P04216 161 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 CEACAM5P06731 702 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 OR8G3PP0DMU2 310 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 ATF4P18848 351 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 STOMP27105 288 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 EIF1AXP47813 144 aaKnown RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 OMPP47874 163 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 TSPAN5P62079 268 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 FCRLAQ7L513 359 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 FTMTQ8N4E7 242 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 TMEM52Q8NDY8 209 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 PHOSPHO1Q8TCT1 267 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 C17orf50Q8WW18 174 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 SPACA7Q96KW9 195 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 C1QTNF2Q9BXJ5 285 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 MTHFD2LQ9H903 347 aaPredicted RBP12.36□□□□□ -0.43
USP42-203ENST00000426246 KLK11Q9UBX7 282 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 FKBP7Q9Y680 259 aa12.36□□□□□ -0.43
USP42-203ENST00000426246 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 FAM25EA8MYX2 175 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 STK25O00506 426 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ICMTO60725 284 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ADPRHP54922 357 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 BNC1Q01954 994 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ASAH1Q13510 395 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 NDUFAF7Q7L592 441 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 KDM8Q8N371 416 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ZNF655Q8N720 491 aaPredicted RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 LGALS14Q8TCE9 139 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 DIO2Q92813 273 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 OR8D2Q9GZM6 311 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 DPAGT1Q9H3H5 408 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 PNO1Q9NRX1 252 aaKnown RBP12.35□□□□□ -0.43
USP42-203ENST00000426246 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 CEP250Q9BV73 2442 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 FXYD6-FXYD2A0A087WZ82 144 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 H0YC42 278 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 H0YGG7 62 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 FLRT2O43155 660 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 ADRB1P08588 477 aa12.35□□□□□ -0.43
USP42-203ENST00000426246 PIPP12273 146 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms