RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ACOXLQ9NUZ1 547 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 SLC7A8Q9UHI5 535 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 POU2F3Q9UKI9 436 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 STK38LQ9Y2H1 464 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PVALEFA0A1B0GWK0 134 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 G3V4G9 280 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 MSH4O15457 936 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CHMP2AO43633 222 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CDC123O75794 336 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 B3GAT3O94766 335 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PMS2P2O95744 297 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CSTAP01040 98 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 CRYABP02511 175 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 ART1P52961 327 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 MLLT10P55197 1068 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 GSCP56915 257 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 EWSR1Q01844 656 aaKnown RBP eCLIP2.23□□□□□ -2.05
MCF2-204ENST00000414978 KLC1Q07866 573 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 RGS1Q08116 209 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PEX6Q13608 980 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 IZUMO4Q1ZYL8 232 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 VITQ6UXI7 678 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 SLC26A9Q7LBE3 791 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PRUNE1Q86TP1 453 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ZNF397Q8NF99 534 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 OR9K2Q8NGE7 335 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 OR1B1Q8NGR6 318 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 OR5B3Q8NH48 314 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 LKAAEAR1Q8TD35 194 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PAQR8Q8TEZ7 354 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 ADIPOR1Q96A54 375 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 MAP3K3Q99759 626 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PARD6BQ9BYG5 372 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 PLA2G2FQ9BZM2 168 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 FAM49AQ9H0Q0 323 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 SDR39U1Q9NRG7 319 aaPredicted RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 SAMSN1Q9NSI8 373 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 GCNT4Q9P109 453 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 MBD2Q9UBB5 411 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 UBIAD1Q9Y5Z9 338 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 IGSF10Q6WRI0 2623 aa2.23□□□□□ -2.05
MCF2-204ENST00000414978 SETXQ7Z333 2677 aaKnown RBP2.23□□□□□ -2.05
MCF2-204ENST00000414978 SAA2-SAA4A0A096LPE2 208 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PRSS37A4D1T9 235 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 MYMKA6NI61 221 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 E9PMD0 336 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 KLRC4O43908 158 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TIMM8AO60220 97 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 NIPSNAP2O75323 286 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 BCAS1O75363 584 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 GPX5O75715 221 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 DIRAS1O95057 198 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LRATO95237 230 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PRB1P04280 392 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PRKCGP05129 697 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 IGHV4-30-4P0DP06 118 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 HLA-EP13747 358 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF43P17038 809 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CEBPBP17676 345 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 PSMC3P17980 439 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF10P21506 573 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 ITGA3P26006 1051 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 S100A5P33763 92 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 UGT1A3P35503 534 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SLC6A8P48029 635 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 KCNJ3P48549 501 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 INHBCP55103 352 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SSTP61278 116 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FOXF2Q12947 444 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TRIP6Q15654 476 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 ECSCRQ19T08 205 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 UNC50Q53HI1 259 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ARMC12Q5T9G4 340 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF776Q68DI1 518 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 Q6ZPA2 131 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 COX8CQ7Z4L0 72 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 SERPINA9Q86WD7 417 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FAM131BQ86XD5 332 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CATSPER3Q86XQ3 398 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 LRRC8AQ8IWT6 810 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 FAM98AQ8NCA5 519 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 TPD52L3Q96J77 140 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 MS4A14Q96JA4 679 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ZNF578Q96N58 590 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 TNFRSF13CQ96RJ3 184 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TIMP4Q99727 224 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TSG101Q99816 390 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 P2RY13Q9BPV8 354 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 DPH7Q9BTV6 452 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 DGCR6LQ9BY27 220 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 KRTAP3-1Q9BYR8 98 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 UBAP1Q9NZ09 502 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 ERVK-19Q9WJR5 959 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 POLDIP2Q9Y2S7 368 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 TESMINQ9Y4I5 508 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 UBR5O95071 2799 aaPredicted RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 ITPR1Q14643 2758 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 DMXL1Q9Y485 3027 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 IGLV3-22A0A075B6J6 115 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 A0A087WUV0 522 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms