RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ABHD18Q0P651 414 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 SLC14A2Q15849 920 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 CDNFQ49AH0 187 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 FNDC3BQ53EP0 1204 aaKnown RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 PABPC1L2AQ5JQF8 200 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 HIST2H3PS2Q5TEC6 136 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 ZFAND4Q86XD8 727 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 SLC35F3Q8IY50 421 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 TTC9BQ8N6N2 239 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 ZNF283Q8N7M2 679 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 FRMD1Q8N878 549 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 NEK7Q8TDX7 302 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 DCUN1D4Q92564 292 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 IMP4Q96G21 291 aaKnown RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 NIPSNAP1Q9BPW8 284 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 ABCC13Q9NSE7 274 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 SNX11Q9Y5W9 270 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 GPR45Q9Y5Y3 372 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 J3KTA2 159 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 DIRAS3O95661 229 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 PTBP3O95758 552 aaKnown RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 PRSS56P0CW18 603 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 RPL3P39023 403 aaKnown RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 GDNFP39905 211 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 ATP4BP51164 291 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 CLDN12P56749 244 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 DLX2Q07687 328 aaPredicted RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 DUOXA1Q1HG43 343 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.86□□□□□ -1.153e-6■■■□□ 15.4
NDE1-202ENST00000396355 TMEM201Q5SNT2 666 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 OR2T2Q6IF00 324 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 TNFAIP8L2Q6P589 184 aaPredicted RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 TSSK4Q6SA08 328 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 BAIAP2L2Q6UXY1 529 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 GDPGP1Q6ZNW5 385 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 OVCH2Q7RTZ1 564 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 HSD17B13Q7Z5P4 300 aaPredicted RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 ISCA2Q86U28 154 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 FAM185AQ8N0U4 392 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 SLC41A3Q96GZ6 507 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 LRIG1Q96JA1 1093 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 SLC25A32Q9H2D1 315 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 B3GAT2Q9NPZ5 323 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 MIEF1Q9NQG6 463 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 ARL15Q9NXU5 204 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 TMEFF2Q9UIK5 374 aaPredicted RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 TRAPPC4Q9Y296 219 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 PCYT1BQ9Y5K3 369 aaPredicted RBP7.86□□□□□ -1.15
NDE1-202ENST00000396355 FRMPD3Q5JV73 1810 aa7.86□□□□□ -1.15
NDE1-202ENST00000396355 C20orf202A1L168 122 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 GGT3PA6NGU5 568 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 FGF10O15520 208 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 HRO43593 1189 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 PCDH7O60245 1069 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TBX18O95935 607 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 CYB5R3P00387 301 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 RPLP2P05387 115 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZNF44P15621 663 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZP2Q05996 745 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TMEM69Q5SWH9 247 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SYT13Q7L8C5 426 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 REC114Q7Z4M0 266 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 CCDC54Q8NEL0 328 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 PSMG2Q969U7 264 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZNF354BQ96LW1 612 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 PBDC1Q9BVG4 233 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 PHF7Q9BWX1 381 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 METTL9Q9H1A3 318 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 FN3KQ9H479 309 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 FKBPLQ9UIM3 349 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SLC22A14Q9Y267 594 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZFC3H1O60293 1989 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 LOC390937A0A1W2PQ73 354 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TRBC2A0A5B9 178 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 M0R143 59 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 LDB2O43679 373 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SCG5P05408 212 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 HCKP08631 526 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 IGFBP1P08833 259 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 BTF3P20290 206 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 SHC1P29353 583 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 STK19P49842 368 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 RENBPP51606 427 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 CBX2Q14781 532 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 ELAVL1Q15717 326 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZDHHC20Q5W0Z9 365 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 RGS7BPQ6MZT1 257 aaPredicted RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 P4HA3Q7Z4N8 544 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 NPAS4Q8IUM7 802 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SIDT2Q8NBJ9 832 aaKnown RBP7.85□□□□□ -1.15
NDE1-202ENST00000396355 RFKQ969G6 155 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TGM7Q96PF1 710 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SEMA3CQ99985 751 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 TLNRD1Q9H1K6 362 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SRMSQ9H3Y6 488 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 IKZF5Q9H5V7 419 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 SPACA1Q9HBV2 294 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 ZFP64Q9NPA5 681 aa7.85□□□□□ -1.15
NDE1-202ENST00000396355 THSD1Q9NS62 852 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms