RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NKX2-6A6NCS4 301 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 HSPB2A8KAH6 182 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 TPST2O60704 377 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 TMIGD3P0DMS9 266 aaPredicted RBP17.85■□□□□ 0.45
SNCA-203ENST00000394986 KLK2P20151 261 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 BMP5P22003 454 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 HTR3AP46098 478 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 CARD18P57730 90 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 BNIP2Q12982 314 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 HSPB2Q16082 182 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 HIST2H2BCQ6DN03 193 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 RBM45Q8IUH3 476 aaKnown RBP17.85■□□□□ 0.45
SNCA-203ENST00000394986 BHLHE22Q8NFJ8 381 aaPredicted RBP17.85■□□□□ 0.45
SNCA-203ENST00000394986 VANGL1Q8TAA9 524 aaPredicted RBP17.85■□□□□ 0.45
SNCA-203ENST00000394986 ASB5Q8WWX0 329 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 ROBO4Q8WZ75 1007 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 SLC35B4Q969S0 331 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 C3orf49Q96BT1 292 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 ARL5BQ96KC2 179 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 TM9SF2Q99805 663 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 TMEM181Q9P2C4 612 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 ZNF175Q9Y473 711 aa17.85■□□□□ 0.45
SNCA-203ENST00000394986 PHF3Q92576 2039 aaKnown RBP17.85■□□□□ 0.45
SNCA-203ENST00000394986 IGHV3-15A0A0B4J1V0 119 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 ZC3H12DA2A288 527 aaKnown RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 RCBTB2O95199 551 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 LGI1O95970 557 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 TNFRSF1BP20333 461 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 COL8A1P27658 744 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 GRNP28799 593 aaKnown RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 MXRA7P84157 204 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 NPTX1Q15818 432 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 ZNF239Q16600 458 aaKnown RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 NRF1Q16656 503 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 PDSS1Q5T2R2 415 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 MAMDC2Q7Z304 686 aaPredicted RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 LILRB4Q8NHJ6 448 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 SLC25A43Q8WUT9 341 aaPredicted RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 KCTD14Q9BQ13 255 aaPredicted RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 PRRG4Q9BZD6 226 aa17.84■□□□□ 0.45
SNCA-203ENST00000394986 PLEKHB1Q9UF11 243 aaPredicted RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 SPIN1Q9Y657 262 aaPredicted RBP17.84■□□□□ 0.45
SNCA-203ENST00000394986 A0A1B0GWA3 101 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 TMEM229AB2RXF0 380 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 SYT5O00445 386 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 CXCR6O00574 342 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 GSTA4O15217 222 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 SYNGR4O95473 234 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 FESP07332 822 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 NCK1P16333 377 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 CXCR1P25024 350 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 KDELR2P33947 212 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 NCALDP61601 193 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 PGAM4Q8N0Y7 254 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 RELL2Q8NC24 303 aaPredicted RBP17.83■□□□□ 0.45
SNCA-203ENST00000394986 FAM156AQ8NDB6 213 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 OR52E4Q8NGH9 312 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 OR6T1Q8NGN1 323 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 NSL1Q96IY1 281 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 RNF122Q9H9V4 155 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 PAQR5Q9NXK6 330 aaPredicted RBP17.83■□□□□ 0.45
SNCA-203ENST00000394986 RPS6KB2Q9UBS0 482 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 TESQ9UGI8 421 aaKnown RBP17.83■□□□□ 0.45
SNCA-203ENST00000394986 MCTS1Q9ULC4 181 aaKnown RBP17.83■□□□□ 0.45
SNCA-203ENST00000394986 CLEC4AQ9UMR7 237 aa17.83■□□□□ 0.45
SNCA-203ENST00000394986 PRSS44E7EML9 344 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 C19orf84I3L1E1 186 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 T-ENOLP0DO92 83 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 CTSSP25774 331 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 HTR1EP28566 365 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 MYBPHQ13203 477 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 CYBRD1Q53TN4 286 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 ATG4DQ86TL0 474 aaPredicted RBP17.82■□□□□ 0.44
SNCA-203ENST00000394986 DEFB107AQ8IZN7 70 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 ZNF559Q9BR84 538 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 EGFL7Q9UHF1 273 aa17.82■□□□□ 0.44
SNCA-203ENST00000394986 SPTBN1Q01082 2364 aaKnown RBP17.82■□□□□ 0.44
SNCA-203ENST00000394986 A0A1W2PNV4 684 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 B2RBV5 119 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 C8BP07358 591 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 TCN1P20061 433 aaPredicted RBP17.81■□□□□ 0.44
SNCA-203ENST00000394986 ENPP1P22413 925 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 CPOXP36551 454 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 DIO1P49895 249 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 SIRPAP78324 504 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 OR1Q1Q15612 314 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 TMPPEQ6ZT21 453 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 TRPM8Q7Z2W7 1104 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 RANBP3LQ86VV4 465 aaPredicted RBP17.81■□□□□ 0.44
SNCA-203ENST00000394986 TSPYL5Q86VY4 417 aaPredicted RBP17.81■□□□□ 0.44
SNCA-203ENST00000394986 RBM15BQ8NDT2 890 aaKnown RBP17.81■□□□□ 0.44
SNCA-203ENST00000394986 RASSF5Q8WWW0 418 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 CPNE4Q96A23 557 aaPredicted RBP17.81■□□□□ 0.44
SNCA-203ENST00000394986 ZFP3Q96NJ6 502 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 CDRT15Q96T59 188 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 MCHR1Q99705 422 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 TRIM2Q9C040 744 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 SH3GLB1Q9Y371 365 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 ICE1Q9Y2F5 2266 aa17.81■□□□□ 0.44
SNCA-203ENST00000394986 ARHGAP21Q5T5U3 1957 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms