RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 TUBA3EQ6PEY2 450 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 YRDCQ86U90 279 aaKnown RBP16.71■□□□□ 0.27
TFRC-202ENST00000392396 NPRL2Q8WTW4 380 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 SLC25A44Q96H78 314 aaPredicted RBP16.71■□□□□ 0.27
TFRC-202ENST00000392396 CCDC115Q96NT0 180 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 FUZQ9BT04 418 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 NXF5Q9H1B4 397 aaKnown RBP16.71■□□□□ 0.27
TFRC-202ENST00000392396 HIPK2Q9H2X6 1198 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 CLMPQ9H6B4 373 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 KCNN3Q9UGI6 736 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 MAS1P04201 325 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 CD82P27701 267 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 NUMA1Q14980 2115 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 LCN8Q6JVE9 175 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 FOXRED2Q8IWF2 684 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 BARD1Q99728 777 aaKnown RBP16.71■□□□□ 0.27
TFRC-202ENST00000392396 GABRG3Q99928 467 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 PCDHGA3Q9Y5H0 932 aa16.71■□□□□ 0.27
TFRC-202ENST00000392396 PLOD2O00469 737 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 NRG2O14511 850 aaPredicted RBP16.71■□□□□ 0.26
TFRC-202ENST00000392396 RGS9O75916 674 aaPredicted RBP16.71■□□□□ 0.26
TFRC-202ENST00000392396 EIF2S3P41091 472 aaKnown RBP16.71■□□□□ 0.26
TFRC-202ENST00000392396 GNMTQ14749 295 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 CARFQ8N187 725 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 TMEM102Q8N9M5 508 aaPredicted RBP16.71■□□□□ 0.26
TFRC-202ENST00000392396 GPBAR1Q8TDU6 330 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 UBXN10Q96LJ8 280 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 C19orf43Q9BQ61 176 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 PDFQ9HBH1 243 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 HHLA2Q9UM44 414 aa16.71■□□□□ 0.26
TFRC-202ENST00000392396 TSPAN12O95859 305 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 CD22P20273 847 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 HBA1P69905 142 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 RUNDC3AQ59EK9 446 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 SLC46A3Q7Z3Q1 461 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 AKAP1Q92667 903 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■□□□ 11.6
TFRC-202ENST00000392396 TM4SF18Q96CE8 201 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 STACQ99469 402 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 REV1Q9UBZ9 1251 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 DLL1O00548 723 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 B4GALT3O60512 393 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 PAHP00439 452 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 CXADRP78310 365 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 LRRC18Q8N456 261 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 OR51T1Q8NGJ9 327 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 ATG4BQ9Y4P1 393 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 LRIT2A6NDA9 550 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 D6RAR5 112 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 SLC1A7O00341 560 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 CNOT4O95628 575 aaKnown RBP16.7■□□□□ 0.26
TFRC-202ENST00000392396 SERPINA5P05154 406 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 DBHP09172 617 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 CAPN3P20807 821 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 PDSS2Q86YH6 399 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 WFDC8Q8IUA0 241 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 CMTM1Q8IZ96 169 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 SLC22A4Q9H015 551 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 ARAFP10398 606 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 GABRR1P24046 479 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 RBM39Q14498 530 aaKnown RBP16.7■□□□□ 0.26
TFRC-202ENST00000392396 PRSS36Q5K4E3 855 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 ZNF684Q5T5D7 378 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 ZNF417Q8TAU3 575 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 ZNF675Q8TD23 568 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 CCDC120Q96HB5 630 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 OR52D1Q9H346 318 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 C1orf198Q9H425 327 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 SMOC1Q9H4F8 434 aa16.7■□□□□ 0.26
TFRC-202ENST00000392396 EME2A4GXA9 379 aaPredicted RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 CRTAPO75718 401 aaPredicted RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 GTF2F2P13984 249 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 IGFBP6P24592 240 aaPredicted RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 P2RX1P51575 399 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 SPHARQ15513 63 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 VASNQ6EMK4 673 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 SBSNQ6UWP8 590 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 TMEM92Q6UXU6 159 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 MARCH3Q86UD3 253 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 P2RY12Q9H244 342 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 TMEM181Q9P2C4 612 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 NDRG4Q9ULP0 352 aaKnown RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 LRP5O75197 1615 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 C13orf42A0A1B0GVH6 325 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 OR2AT4A6NND4 320 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 DLGAP1O14490 977 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 PET100P0DJ07 73 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 SLC2A5P22732 501 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 SAMD12Q8N8I0 201 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 OR8J2Q8NGG1 315 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 APOBEC4Q8WW27 367 aaKnown RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 MS4A6EQ96DS6 147 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 GDF15Q99988 308 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 TREX2Q9BQ50 279 aaPredicted RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 DOCK1Q14185 1865 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 OR6C70A6NIJ9 312 aa16.69■□□□□ 0.26
TFRC-202ENST00000392396 KDM4EB2RXH2 506 aaPredicted RBP16.69■□□□□ 0.26
TFRC-202ENST00000392396 CBX7O95931 251 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms