RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 GSK3AP49840 483 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GTF2BQ00403 316 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 CELF3Q5SZQ8 465 aaKnown RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 ZNF648Q5T619 568 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 HHIPL2Q6UWX4 724 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 FAM196AQ6ZSG2 479 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SPATA31D4Q6ZUB0 917 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LILRB1Q8NHL6 650 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 SPPL2BQ8TCT7 592 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ACSS2Q9NR19 701 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR6C76A6NM76 312 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PRNPP04156 253 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR8U8P0C7N1 319 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR10J1P30954 320 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 IL10RBQ08334 325 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LRIT3Q3SXY7 679 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 EEF1DP3Q658K8 133 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 B3GNTL1Q67FW5 361 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR4K13Q8NH42 304 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 COPS9Q8WXC6 57 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 MAP3K3Q99759 626 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 MAGEH1Q9H213 219 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PORCNQ9H237 461 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 MIOXQ9UGB7 285 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PCDHA9Q9Y5H5 950 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 A0A0U1RQJ8 604 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GPR12P47775 334 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ZP2Q05996 745 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 HLA-BQ31612 363 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 TAS1R3Q7RTX0 852 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 AMZ2Q86W34 360 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 SLC35F2Q8IXU6 374 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR4F5Q8NH21 305 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OR4F4Q96R69 305 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ZNF814B7Z6K7 855 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 PRICKLE3O43900 615 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 ADRB2P07550 413 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 FABP2P12104 132 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GPLD1P80108 840 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 GRM2Q14416 872 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 Q6ZRG5 221 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 OTOP1Q7RTM1 612 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LRP11Q86VZ4 500 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LYSMD2Q8IV50 215 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LRRC56Q8IYG6 542 aaPredicted RBP8.23□□□□□ -1.09
LIG3-202ENST00000378526 SLC16A10Q8TF71 515 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 LRFN3Q9BTN0 628 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 ENKD1Q9H0I2 346 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 RCE1Q9Y256 329 aa8.23□□□□□ -1.09
LIG3-202ENST00000378526 IQGAP3Q86VI3 1631 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CABIN1Q9Y6J0 2220 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 GABRR3A8MPY1 467 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 IQCF5A8MTL0 148 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CRHBPP24387 322 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 DUSP1P28562 367 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 INPP5JQ15735 1006 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 ACSM3Q53FZ2 586 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 LRRC55Q6ZSA7 311 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ZCCHC10Q8TBK6 192 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ASB17Q8WXJ9 295 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 OR5P2Q8WZ92 322 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ZNF845Q96IR2 970 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 TRIB1Q96RU8 372 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 FEVQ99581 238 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 MRPL17Q9NRX2 175 aaKnown RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 MN1Q10571 1320 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 SAP18O00422 153 aaKnown RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 ACP2P11117 423 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CRABP1P29762 137 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CD80P33681 288 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 IL24Q13007 206 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 SPANXN4Q5MJ08 99 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 PLCXD3Q63HM9 321 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 IL31RAQ8NI17 732 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 DVL3Q92997 716 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 PLEKHA2Q9HB19 425 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 C19orf25Q9UFG5 118 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 OSGIN1Q9UJX0 560 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 SOX21Q9Y651 276 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 SLX4Q8IY92 1834 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 OAS1P00973 400 aaKnown RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 EIF4EP06730 217 aaKnown RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 F3P13726 295 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 GPR162Q16538 588 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ERASQ7Z444 233 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 C6orf201Q7Z4U5 140 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 RGL4Q8IZJ4 473 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 FAM169BQ8N8A8 192 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 OR52E2Q8NGJ4 325 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 PARD6GQ9BYG4 376 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 PBX4Q9BYU1 374 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 NARFLQ9H6Q4 476 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 BCORL1Q5H9F3 1711 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ANKRD26Q9UPS8 1709 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 SYNGR4O95473 234 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 PNMTP11086 282 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 PBX1P40424 430 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 EPHA5P54756 1037 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 EMP1P54849 157 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms