RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CALCRP30988 508 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 RGS19P49795 217 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 CCR9P51686 369 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 MELKQ14680 651 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 METTL11BQ5VVY1 283 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 PAQR7Q86WK9 346 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 KRT78Q8N1N4 520 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ACBD7Q8N6N7 88 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 LINC01555Q8NAE3 123 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 FAM71CQ8NEG0 241 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 C17orf47Q8NEP4 570 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 RGMAQ96B86 450 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 GIMAP5Q96F15 307 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ZNF514Q96K75 400 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 SLC38A3Q99624 504 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 MENTQ9BUN1 341 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 EFCAB11Q9BUY7 163 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 JAM3Q9BX67 310 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 HRASLSQ9HDD0 168 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 NANSQ9NR45 359 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ZNF275Q9NSD4 429 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 P2RX2Q9UBL9 471 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 TRPC4Q9UBN4 977 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 PCDHGA9Q9Y5G4 932 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 WDFY4Q6ZS81 3184 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 A0A1B0GUH1 482 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ABCD4O14678 606 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 PRAF2O60831 178 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 RP2O75695 350 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 SIX6O95475 246 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 TBX6O95947 436 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 CEACAM5P06731 702 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 S100A11P31949 105 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 OMPP47874 163 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 STXBP1P61764 594 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 PGGHGQ32M88 737 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 NXPE4Q6UWF7 544 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 TMUB2Q71RG4 321 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 SPICQ8N5J4 248 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 OR13C5Q8NGS8 318 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 EXOSC8Q96B26 276 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 QRSL1Q9H0R6 528 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 MED20Q9H944 212 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 H2AFY2Q9P0M6 372 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 PIAS3Q9Y6X2 628 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 C2CD4DB7Z1M9 353 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 D6RAR5 112 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 ARPC5O15511 151 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 GSTZ1O43708 216 aaPredicted RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 GABRA1P14867 456 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 RAB3BP20337 219 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 IGFBP4P22692 258 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 TNFRSF4P43489 277 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 GPR4P46093 362 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 TAS2R41P59536 307 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 PSMA6P60900 246 aaKnown RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 SGCGQ13326 291 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 TMEM44Q2T9K0 475 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 B3GNTL1Q67FW5 361 aaPredicted RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 FAM98AQ8NCA5 519 aaKnown RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 WDR34Q96EX3 536 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 MACROD1Q9BQ69 325 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 FANCFQ9NPI8 374 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 SEMA4GQ9NTN9 838 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 ZNF69Q9UC07 566 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 CAMK2AQ9UQM7 478 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 WDR87Q6ZQQ6 2873 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 A0A1W2PPK0 400 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 PRR23D1E9PI22 279 aaPredicted RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 EML2O95834 649 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 CHRM4P08173 479 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 ADRB1P08588 477 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 PRR23D2P0DMB1 279 aaPredicted RBP11.94□□□□□ -0.5
MSH5-204ENST00000375755 MAOBP27338 520 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 AHRP35869 848 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 ACVR1BP36896 505 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 ARHGDIBP52566 201 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 RAP2BP61225 183 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 PRAMEF14Q5SWL7 426 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 PRAMEF13Q5VWM6 474 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 RPTNQ6XPR3 784 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 PXKQ7Z7A4 578 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 OR5K2Q8NHB8 316 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 C12orf57Q99622 126 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 TMPRSS13Q9BYE2 586 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 TRIM36Q9NQ86 728 aa11.94□□□□□ -0.5
MSH5-204ENST00000375755 TRBV23OR9-2A0A075B6M9 112 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 CPSF4LA6NMK7 179 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 H7BY64 318 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 PTNP21246 168 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 GPR85P60893 370 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 SEC61A1P61619 476 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 PLBD1Q6P4A8 553 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 CXXC5Q7LFL8 322 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 RD3Q7Z3Z2 195 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms