RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 RSPO3Q9BXY4 272 aaPredicted RBP12.88□□□□□ -0.35
SSR4-203ENST00000370086 RABEP2Q9H5N1 569 aa12.88□□□□□ -0.35
SSR4-203ENST00000370086 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
SSR4-203ENST00000370086 BCL2L10Q9HD36 194 aa12.88□□□□□ -0.35
SSR4-203ENST00000370086 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
SSR4-203ENST00000370086 SPIN1Q9Y657 262 aaPredicted RBP12.88□□□□□ -0.35
SSR4-203ENST00000370086 GMEB1Q9Y692 573 aa12.88□□□□□ -0.35
SSR4-203ENST00000370086 CELSR1Q9NYQ6 3014 aa12.88□□□□□ -0.35
SSR4-203ENST00000370086 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 TMEM247A6NEH6 219 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 SULT2B1O00204 365 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 CASKO14936 926 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 GOSR1O95249 250 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 PGM3O95394 542 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 PRG2P13727 222 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 SLC1A3P43003 542 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 POLR2HP52434 150 aaKnown RBP12.87□□□□□ -0.35
SSR4-203ENST00000370086 RASGEF1BQ0VAM2 473 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 TESK1Q15569 626 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 CGB2Q6NT52 195 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 STAC2Q6ZMT1 411 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 BEND4Q6ZU67 534 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 ZNF300Q96RE9 604 aaPredicted RBP12.87□□□□□ -0.35
SSR4-203ENST00000370086 MED18Q9BUE0 208 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 TMEM120AQ9BXJ8 343 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 ADAM19Q9H013 955 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 BCO1Q9HAY6 547 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 C6orf203Q9P0P8 240 aaPredicted RBP12.87□□□□□ -0.35
SSR4-203ENST00000370086 ZNF232Q9UNY5 417 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 TRIM33Q9UPN9 1127 aa12.87□□□□□ -0.35
SSR4-203ENST00000370086 ABCA4P78363 2273 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 ZC3H12DA2A288 527 aaKnown RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 PMS2P2O95744 297 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 ARAFP10398 606 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 GPX2P18283 190 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 PPIBP23284 216 aaKnown RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 HTR3AP46098 478 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 IST1P53990 364 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 SF3A3Q12874 501 aaKnown RBP eCLIP12.86□□□□□ -0.351e-16■□□□□ 8.2
SSR4-203ENST00000370086 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 GCNT6Q5T4J0 391 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 SERPINA11Q86U17 422 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 MTDHQ86UE4 582 aaKnown RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 BBS10Q8TAM1 723 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 ZNF775Q96BV0 537 aaPredicted RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 PLEKHF2Q9H8W4 249 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 FGFR1OP2Q9NVK5 253 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 KLHL9Q9P2J3 617 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 LEF1Q9UJU2 399 aaPredicted RBP12.86□□□□□ -0.35
SSR4-203ENST00000370086 IFT52Q9Y366 437 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 NDUFAF1Q9Y375 327 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 AKAP6Q13023 2319 aa12.86□□□□□ -0.35
SSR4-203ENST00000370086 DEFB108AA8MXU0 73 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 ZNF814B7Z6K7 855 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 ZNF208O43345 1280 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 GCM2O75603 506 aaPredicted RBP12.85□□□□□ -0.35
SSR4-203ENST00000370086 THBDP07204 575 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 IMPDH2P12268 514 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 UQCRBP14927 111 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 CRYGSP22914 178 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 EDNRAP25101 427 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 FKBP2P26885 142 aaKnown RBP12.85□□□□□ -0.35
SSR4-203ENST00000370086 OR2B6P58173 313 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 CDK6Q00534 326 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 GUCY1A3Q02108 690 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 ADRM1Q16186 407 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 ZSWIM7Q19AV6 140 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 METTL21CQ5VZV1 264 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 ABLIM2Q6H8Q1 611 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 COMTD1Q86VU5 262 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 CXorf67Q86X51 503 aaPredicted RBP12.85□□□□□ -0.35
SSR4-203ENST00000370086 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 DPP10Q8N608 796 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 TACO1Q9BSH4 297 aaKnown RBP12.85□□□□□ -0.35
SSR4-203ENST00000370086 CCM2LQ9NUG4 571 aaPredicted RBP12.85□□□□□ -0.35
SSR4-203ENST00000370086 ZNF226Q9NYT6 803 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 PRSS50Q9UI38 385 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 PLEKHA6Q9Y2H5 1048 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 PRR14LQ5THK1 2151 aa12.85□□□□□ -0.35
SSR4-203ENST00000370086 CCDC168Q8NDH2 2452 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms