RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 HLA-CQ95604 372 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 RNF170Q96K19 258 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 TMED9Q9BVK6 235 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 IFT27Q9BW83 186 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 CHRNA10Q9GZZ6 450 aa20.79■□□□□ 0.92
LDB1-201ENST00000361198 ZC3H12DA2A288 527 aaKnown RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 A8MV72 311 aaPredicted RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 PTP4A3O75365 173 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 CLPSP04118 112 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 MRPS15P82914 257 aaKnown RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 FOXK2Q01167 660 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 RPL13AP3Q6NVV1 102 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 ZNF322Q6U7Q0 402 aaPredicted RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 TTLL10Q6ZVT0 673 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 MARCH9Q86YJ5 346 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 CADM2Q8N3J6 435 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 SPRYD4Q8WW59 207 aaPredicted RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 ZNF578Q96N58 590 aaPredicted RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 TNFRSF10DQ9UBN6 386 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 WNT16Q9UBV4 365 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 HPGDSO60760 199 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 SLC2A2P11168 524 aaPredicted RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 HLA-DMAP28067 261 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 BDH1Q02338 343 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 ZNF791Q3KP31 576 aaPredicted RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 NIPAL3Q6P499 406 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 SDR16C5Q8N3Y7 309 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 Q8N402 240 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 SPEM1Q8N4L4 309 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 DUSP18Q8NEJ0 188 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 AHCYL2Q96HN2 611 aaKnown RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 DMRTB1Q96MA1 342 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 LMF1Q96S06 567 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 FN3KQ9H479 309 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 TBC1D17Q9HA65 648 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 CUTCQ9NTM9 273 aa20.78■□□□□ 0.92
LDB1-201ENST00000361198 NUFIP1Q9UHK0 495 aaKnown RBP20.78■□□□□ 0.92
LDB1-201ENST00000361198 H3BMH7 237 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 OR1D4P47884 311 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 EPHA4P54764 986 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 KIRREL2Q6UWL6 708 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 GID4Q8IVV7 300 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 ASCC1Q8N9N2 400 aaKnown RBP20.77■□□□□ 0.92
LDB1-201ENST00000361198 ENKURQ8TC29 256 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 PTP4A1Q93096 173 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 SENP5Q96HI0 755 aaPredicted RBP20.77■□□□□ 0.92
LDB1-201ENST00000361198 SHDQ96IW2 340 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 YIPF2Q9BWQ6 316 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 CMC2Q9NRP2 79 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 LANCL2Q9NS86 450 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 RBFOX1Q9NWB1 397 aaKnown RBP20.77■□□□□ 0.92
LDB1-201ENST00000361198 EML5Q05BV3 1969 aa20.77■□□□□ 0.92
LDB1-201ENST00000361198 TP53BP1Q12888 1972 aaPredicted RBP20.77■□□□□ 0.92
LDB1-201ENST00000361198 ARID1BQ8NFD5 2236 aaPredicted RBP20.77■□□□□ 0.91
LDB1-201ENST00000361198 C17orf105B2RV13 164 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 OR2B3O76000 313 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 FAM157BP0CG42 384 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 ALAS2P22557 587 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 MAP2K3P46734 347 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 SERTAD2Q14140 314 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 QPRTQ15274 297 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 P2RY14Q15391 338 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 PRPF38BQ5VTL8 546 aaKnown RBP20.76■□□□□ 0.91
LDB1-201ENST00000361198 FCRLBQ6BAA4 426 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 TMEM91Q6ZNR0 172 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 MEPCEQ7L2J0 689 aaKnown RBP20.76■□□□□ 0.91
LDB1-201ENST00000361198 ZNF550Q7Z398 422 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 OAFQ86UD1 273 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 ZSCAN1Q8NBB4 408 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.76■□□□□ 0.91
LDB1-201ENST00000361198 TNFRSF13CQ96RJ3 184 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 IGHV1OR21-1A0A087WYE8 117 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 GNB5O14775 395 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 CFHR1Q03591 330 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 CRYZQ08257 329 aaKnown RBP20.76■□□□□ 0.91
LDB1-201ENST00000361198 PRAMEF17Q5VTA0 474 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 LINC00114Q6XXX2 140 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 UTS2BQ765I0 119 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 C19orf18Q8NEA5 215 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 LILRB4Q8NHJ6 448 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 KCNJ15Q99712 375 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 RNF32Q9H0A6 362 aa20.76■□□□□ 0.91
LDB1-201ENST00000361198 RANGRFQ9HD47 186 aaPredicted RBP20.76■□□□□ 0.91
LDB1-201ENST00000361198 FAM86C2PA6NEL3 165 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 TMEM150CB9EJG8 249 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 SCO2O43819 266 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 CSTAP01040 98 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 PAICSP22234 425 aaKnown RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 RBM34P42696 430 aaKnown RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 CSTF1Q05048 431 aaKnown RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 FHL1Q13642 323 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 TRIQKQ629K1 86 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 MZT2AQ6P582 158 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 ULK3Q6PHR2 472 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 PLET1Q6UQ28 207 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 ZNF321PQ8N8H1 164 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 SLC37A3Q8NCC5 494 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 PTPMT1Q8WUK0 201 aaPredicted RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 CLIP3Q96DZ5 547 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 DHCR7Q9UBM7 475 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms