RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MS4A15Q8N5U1 240 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ARIH2OSQ8N7S6 290 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF707Q96C28 371 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SYNPO2LQ9H987 977 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 CA5BQ9Y2D0 317 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 MED31Q9Y3C7 131 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SDK1Q7Z5N4 2213 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SSNA1O43805 119 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC43A1O75387 559 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 RCBTB2O95199 551 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 PPP1R3DO95685 299 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 MAKP20794 623 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 NAA10P41227 235 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 EXOSC7Q15024 291 aaKnown RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SFXN4Q6P4A7 337 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZFP82Q8N141 532 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF433Q8N7K0 673 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 ACOT12Q8WYK0 555 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 PIGKQ92643 395 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 BPIFA2Q96DR5 249 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC17A9Q9BYT1 436 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 TMEM27Q9HBJ8 222 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 SNRNP200O75643 2136 aaKnown RBP15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 CACNA1IQ9P0X4 2223 aa15.3■□□□□ 0.04
CDC42EP4-201ENST00000335793 B3GALT2O43825 422 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 MYOGP15173 224 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 DRD5P21918 477 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 GABRA3P34903 492 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 GJA4P35212 333 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZIC1Q15915 447 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 TP53I3Q53FA7 332 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 ACSM3Q53FZ2 586 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 EIPR1Q53HC9 387 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 EOGTQ5NDL2 527 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 HBMQ6B0K9 141 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 MRM1Q6IN84 353 aaKnown RBP15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 NUDT18Q6ZVK8 323 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 OAFQ86UD1 273 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 LRRC28Q86X40 367 aaPredicted RBP15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 ADGRG3Q86Y34 549 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 DUSP18Q8NEJ0 188 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 RBP7Q96R05 134 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 SDF2Q99470 211 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 TEX101Q9BY14 249 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 CES1P1Q9UKY3 287 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC9B1P1A6NJY1 282 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 DNAJB6O75190 326 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 CEACAM5P06731 702 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 CBR1P16152 277 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 CRMP1Q14194 572 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 GPR139Q6DWJ6 353 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 TANGO2Q6ICL3 276 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR5M3Q8NGP4 307 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 ABHD4Q8TB40 342 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZMYND19Q96E35 227 aaPredicted RBP15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 NARS2Q96I59 477 aaKnown RBP15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 TEAD3Q99594 435 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 MARVELD1Q9BSK0 173 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 GSDMCQ9BYG8 508 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 MED17Q9NVC6 651 aa15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 LYARQ9NX58 379 aaKnown RBP15.29■□□□□ 0.04
CDC42EP4-201ENST00000335793 YKT6O15498 198 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 STX11O75558 287 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 GIFP27352 417 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 RPL4P36578 427 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 KIAA1024LP59773 190 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 FOXK2Q01167 660 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ANGPT1Q15389 498 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC25A35Q3KQZ1 300 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 NIPAL3Q6P499 406 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 TMEM88Q6PEY1 159 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 THSD4Q6ZMP0 1018 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SNX33Q8WV41 574 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 DPAGT1Q9H3H5 408 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ESRP2Q9H6T0 727 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 IL23AQ9NPF7 189 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ACTR10Q9NZ32 417 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SESN1Q9Y6P5 492 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 A0A0A6YYJ9 748 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SLC22A31A6NKX4 558 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 FZD7O75084 574 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 RASGRP1O95267 797 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 SNRPBP14678 240 aaKnown RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 CXCL3P19876 107 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 RUNX3Q13761 415 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ETFDHQ16134 617 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 RTL4Q6ZR62 310 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 NR2C2APQ86WQ0 139 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF655Q8N720 491 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 MFSD9Q8NBP5 474 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 OR4K13Q8NH42 304 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 GHSRQ92847 366 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 FGF11Q92914 225 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 TSACCQ96A04 125 aaPredicted RBP15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ZNF681Q96N22 645 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 ASB16Q96NS5 453 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 CACNG6Q9BXT2 260 aa15.28■□□□□ 0.04
CDC42EP4-201ENST00000335793 FGF22Q9HCT0 170 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms