RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 ZNF550Q7Z398 422 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 TPRA1Q86W33 373 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 OR13H1Q8NG92 308 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 PATE1Q8WXA2 126 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 TMEM43Q9BTV4 400 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 ENKD1Q9H0I2 346 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 DDX28Q9NUL7 540 aaKnown RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 RBFOX1Q9NWB1 397 aaKnown RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 A0A1B0GWA3 101 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 SHISA3A0PJX4 238 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 C10orf142B7Z368 130 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 SGK494L7N484 410 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 TRIM3O75382 744 aaPredicted RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 NCR1O76036 304 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 PEPDP12955 493 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 FUT1P19526 365 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 KIR2DL3P43628 341 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 NKX2-5P52952 324 aaPredicted RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 TBRG1Q3YBR2 411 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 CCDC92Q53HC0 331 aaPredicted RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 PLET1Q6UQ28 207 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 LSMEM1Q8N8F7 131 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 HSPA12BQ96MM6 686 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 TIMP4Q99727 224 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 ZNF426Q9BUY5 554 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 FOLH1BQ9HBA9 442 aa13.07□□□□□ -0.32
RAB40A-201ENST00000304236 MEPEQ9NQ76 525 aaPredicted RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 MRPS33Q9Y291 106 aaKnown RBP13.07□□□□□ -0.32
RAB40A-201ENST00000304236 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 RDH16O75452 317 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 SLC2A5P22732 501 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 SSTR4P31391 388 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
RAB40A-201ENST00000304236 INPP1P49441 399 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 TAF8Q7Z7C8 310 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 OAFQ86UD1 273 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 DEFB124Q8NES8 71 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 ADAMTS18Q8TE60 1221 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 GRHL3Q8TE85 626 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 SLC7A6Q92536 515 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
RAB40A-201ENST00000304236 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
RAB40A-201ENST00000304236 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 OR51V1Q9H2C8 321 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 TP63Q9H3D4 680 aaPredicted RBP13.06□□□□□ -0.32
RAB40A-201ENST00000304236 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
RAB40A-201ENST00000304236 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 POMT2Q9UKY4 750 aa13.06□□□□□ -0.32
RAB40A-201ENST00000304236 TTC36A6NLP5 189 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 A8MU76 341 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 REM1O75628 298 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SYPP08247 313 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 CTSEP14091 401 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 S1PR1P21453 382 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 ACAA2P42765 397 aaKnown RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SLC16A1P53985 500 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 PSG6Q00889 435 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 IFITM2Q01629 132 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 PLAURQ03405 335 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 ZNF141Q15928 474 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 WDR45BQ5MNZ6 344 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 ZNF362Q5T0B9 420 aaPredicted RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 PAMR1Q6UXH9 720 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 B3GLCTQ6Y288 498 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 LRRC28Q86X40 367 aaPredicted RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 CMIPQ8IY22 773 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SLC22A18ASQ8N1D0 253 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 MS4A15Q8N5U1 240 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 TEX19Q8NA77 164 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 OR51A7Q8NH64 312 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SMPDL3BQ92485 455 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 ART5Q96L15 291 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 TBX5Q99593 518 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 ADGRL4Q9HBW9 690 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 RPS6KB2Q9UBS0 482 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 KLHL21Q9UJP4 597 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SERTAD3Q9UJW9 196 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 RBMX2Q9Y388 322 aaKnown RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 NOX1Q9Y5S8 564 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 TRAV27A0A087WT01 109 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 LYRM1O43325 122 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 SRPX2O60687 465 aaPredicted RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 PPP1R3DO95685 299 aa13.05□□□□□ -0.32
RAB40A-201ENST00000304236 RNH1P13489 461 aaKnown RBP13.05□□□□□ -0.32
RAB40A-201ENST00000304236 S100A1P23297 94 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms