RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 SSX6Q7RTT6 188 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 KANSL1Q7Z3B3 1105 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 TIGD4Q8IY51 512 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 SLC37A3Q8NCC5 494 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 RASD2Q96D21 266 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 ATF6BQ99941 703 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 LYARQ9NX58 379 aaKnown RBP12.47□□□□□ -0.41
TTC39B-201ENST00000297615 IER3IP1Q9Y5U9 82 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 ALG5Q9Y673 324 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 RIF1Q5UIP0 2472 aaKnown RBP12.47□□□□□ -0.41
TTC39B-201ENST00000297615 TMEM129A0AVI4 362 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 AKR7A2O43488 359 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 SYPP08247 313 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
TTC39B-201ENST00000297615 PLAURQ03405 335 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 MLC1Q15049 377 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 PRICKLE4Q2TBC4 344 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 CDK20Q8IZL9 346 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 YIPF7Q8N8F6 280 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 ZNF524Q96C55 264 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 NMNAT3Q96T66 252 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 CDCA3Q99618 268 aaPredicted RBP12.47□□□□□ -0.41
TTC39B-201ENST00000297615 ARHGDIGQ99819 225 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
TTC39B-201ENST00000297615 PRTFDC1Q9NRG1 225 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 CALML5Q9NZT1 146 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 MTCH2Q9Y6C9 303 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 CDH10Q9Y6N8 788 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 CEP250Q9BV73 2442 aa12.47□□□□□ -0.41
TTC39B-201ENST00000297615 GPR89AB7ZAQ6 455 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 CDC40O60508 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 GPR89BP0CG08 455 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ZNF628Q5EBL2 1059 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 NANOGNBQ7Z5D8 188 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ASCC1Q8N9N2 400 aaKnown RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ZNF511Q8NB15 262 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 PCNPQ8WW12 178 aaKnown RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ATOH1Q92858 354 aaPredicted RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 PTP4A1Q93096 173 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 RPRD1BQ9NQG5 326 aaKnown RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 IL20Q9NYY1 176 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 RPS6KB2Q9UBS0 482 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 TVP23AA6NH52 213 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 LYRM1O43325 122 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 CSTAP01040 98 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 CD3GP09693 182 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ENDOUP21128 410 aaKnown RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 FPR3P25089 353 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 SQSTM1Q13501 440 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 SLC25A35Q3KQZ1 300 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 C1QL3Q5VWW1 255 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 KIRREL2Q6UWL6 708 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ZNF619Q8N2I2 560 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 OR2L13Q8N349 312 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 LINC00471Q8N535 108 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 ZNF433Q8N7K0 673 aaPredicted RBP12.46□□□□□ -0.41
TTC39B-201ENST00000297615 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 C16orf52Q8NHV5 167 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 SFXN5Q8TD22 340 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 PRSS27Q9BQR3 290 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
TTC39B-201ENST00000297615 KDM4EB2RXH2 506 aaPredicted RBP12.46□□□□□ -0.42
TTC39B-201ENST00000297615 PROS1P07225 676 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 PRKAR1AP10644 381 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 POU3F3P20264 500 aaPredicted RBP12.46□□□□□ -0.42
TTC39B-201ENST00000297615 BCKDHBP21953 392 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 AHCYP23526 432 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 STAT5AP42229 794 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 CLDN12P56749 244 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 Q5BKY6 102 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 DMRTC1Q5HYR2 192 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 KIAA0895LQ68EN5 471 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 SIX5Q8N196 739 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 C19orf47Q8N9M1 422 aaKnown RBP12.46□□□□□ -0.42
TTC39B-201ENST00000297615 OR5W2Q8NH69 310 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 PDCD1LG2Q9BQ51 273 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 SLC7A5P2Q9GIP4 190 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 PIGUQ9H490 435 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.42
TTC39B-201ENST00000297615 TRPV5Q9NQA5 729 aa12.46□□□□□ -0.42
TTC39B-201ENST00000297615 TRAPPC13A5PLN9 417 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 TMEM150CB9EJG8 249 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 FAM47E-STBD1D6RA91 191 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 RNF13O43567 381 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 PTHLHP12272 177 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 BMP8BP34820 402 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 KIAA1024LP59773 190 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 FOXK2Q01167 660 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 BCL2L15Q5TBC7 163 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 BMP8AQ7Z5Y6 402 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 SERPINA12Q8IW75 414 aa12.45□□□□□ -0.42
TTC39B-201ENST00000297615 OR5J2Q8NH18 312 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms