RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 U3KQ87 197 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SLC22A31A6NKX4 558 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 TRIM3O75382 744 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 TFPIP10646 304 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 PER3P56645 1201 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 PDGFRLQ15198 375 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 ZNF77Q15935 545 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 SFTPA2Q8IWL1 248 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 ZNF676Q8N7Q3 588 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 OR52I2Q8NH67 350 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 DVL3Q92997 716 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 NXPE2Q96DL1 559 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 LRIG1Q96JA1 1093 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 LIPT1Q9Y234 373 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 MAB21L2Q9Y586 359 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 ARRDC5A6NEK1 342 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 ANXA2P2A6NMY6 339 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 C11orf98E9PRG8 122 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 SGK494L7N484 410 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 PLGP00747 810 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 F13BP05160 661 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 ANXA2P07355 339 aaKnown RBP12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 SBK2P0C263 348 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 FPR3P25089 353 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 PRMT2P55345 433 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 TNK1Q13470 666 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 ASPGQ86U10 573 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 GJD3Q8N144 294 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 C9orf62Q8N4C0 152 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 OR4N2Q8NGD1 307 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 OR2T4Q8NH00 348 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 MOSPD2Q8NHP6 518 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 TRIM43Q96BQ3 446 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 RASD2Q96D21 266 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 LMF1Q96S06 567 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 MS4A7Q9GZW8 240 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 NDOR1Q9UHB4 597 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 COPS3Q9UNS2 423 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 GBF1Q92538 1859 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 PLXNA4Q9HCM2 1894 aa12.32□□□□□ -0.44
TNFRSF21-201ENST00000296861 KAT7O95251 611 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ANKRD34CP0C6C1 535 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 RAD52P43351 418 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 SELENOPP49908 381 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 GALEQ14376 348 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 SMAD2Q15796 467 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 CST6Q15828 149 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 DCST2Q5T1A1 773 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 MFSD12Q6NUT3 480 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 WDR88Q6ZMY6 472 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 IDO2Q6ZQW0 420 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 LSM14AQ8ND56 463 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ZDHHC1Q8WTX9 485 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 PTP4A1Q93096 173 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 SLC25A36Q96CQ1 311 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 RBM18Q96H35 190 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ADAD1Q96M93 576 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 PRSS16Q9NQE7 514 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 PHF11Q9UIL8 331 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 FARSAQ9Y285 508 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 C17orf113A0A1B0GUU1 675 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 CXCL10P02778 98 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 TCTE1Q5JU00 501 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ZNF782Q6ZMW2 699 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ZAR1Q86SH2 424 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 TSEN15Q8WW01 171 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 PRDM7Q9NQW5 492 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 A0A087WV48 116 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 A0A1W2PPV9 198 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 POM121BA6NF01 834 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 SPINT1O43278 529 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 PRICKLE3O43900 615 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 RAF1P04049 648 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 FGF9P31371 208 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 GAS6Q14393 721 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 AMZ1Q400G9 498 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 SCGB2B2Q4G0G5 96 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 TTLQ8NG68 377 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 SDF2Q99470 211 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 ELF4Q99607 663 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 PDCD10Q9BUL8 212 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 AICDAQ9GZX7 198 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 IL21RQ9HBE5 538 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 FGF22Q9HCT0 170 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 CLDND1Q9NY35 253 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 IL20Q9NYY1 176 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 TBX21Q9UL17 535 aa12.31□□□□□ -0.44
TNFRSF21-201ENST00000296861 KDM4EB2RXH2 506 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF21-201ENST00000296861 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
TNFRSF21-201ENST00000296861 THY1P04216 161 aa12.3□□□□□ -0.44
TNFRSF21-201ENST00000296861 DCTDP32321 178 aa12.3□□□□□ -0.44
TNFRSF21-201ENST00000296861 PTH2RP49190 550 aa12.3□□□□□ -0.44
TNFRSF21-201ENST00000296861 CDONQ4KMG0 1287 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms