RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CALHM2Q9HA72 323 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 PAQR5Q9NXK6 330 aaPredicted RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 PCDHGA5Q9Y5G8 931 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TRAV27A0A087WT01 109 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ZNF891A8MT65 544 aaPredicted RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 K7EQS6 105 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 MITFO75030 526 aaPredicted RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 CCNKO75909 580 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 WNT11O96014 354 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 HLCSP50747 726 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 METAP1P53582 386 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ZNF791Q3KP31 576 aaPredicted RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ZNF585AQ6P3V2 769 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TRAPPC6BQ86SZ2 158 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 GPBAR1Q8TDU6 330 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ENAMQ9NRM1 1142 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 FAM86C1Q9NVL1 165 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 MED11Q9P086 117 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ZNF223Q9UK11 482 aaPredicted RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 CMAHPQ9Y471 501 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 WNK3Q9BYP7 1800 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 GLSO94925 669 aaPredicted RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 NUDT7P0C024 238 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 PSKH1P11801 424 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 UGT2B10P36537 528 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 ALG8Q9BVK2 526 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 C1QTNF3Q9BXJ4 246 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TMEM38AQ9H6F2 299 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 KCNS2Q9ULS6 477 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 A0A1W2PPK0 400 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ISPDA4D126 451 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TRIM64A6NGJ6 449 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 VAMP5O95183 116 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TRIM23P36406 574 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 ADH7P40394 386 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 PITPNBP48739 271 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 MECP2P51608 486 aaKnown RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 KEAP1Q14145 624 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TMEM69Q5SWH9 247 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 CA13Q8N1Q1 262 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 TRMT10AQ8TBZ6 339 aaKnown RBP12.91□□□□□ -0.34
CDH1-201ENST00000261769 MICU1Q9BPX6 476 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 SLC30A2Q9BRI3 323 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 KLHL9Q9P2J3 617 aa12.91□□□□□ -0.34
CDH1-201ENST00000261769 SLC1A7O00341 560 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 IL2RAP01589 272 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 APOBEC1P41238 236 aaKnown RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 CAMK2DQ13557 499 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 OGFRL1Q5TC84 451 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 FRMPD2BQ6IN97 320 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 MARCH3Q86UD3 253 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 CCDC36Q8IYA8 594 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 ZNF420Q8TAQ5 688 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 MBD2Q9UBB5 411 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 ABCD2Q9UBJ2 740 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 SH2B3Q9UQQ2 575 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 I6L893 689 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 UBFD1O14562 309 aaKnown RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 FGF17O60258 216 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 DRD3P35462 400 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 SOX3P41225 446 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 P2RX1P51575 399 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 ZNF417Q8TAU3 575 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 RAB39BQ96DA2 213 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 GPR78Q96P69 363 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 INPP5EQ9NRR6 644 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 HHLA2Q9UM44 414 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 TVP23AA6NH52 213 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 MT-ATP6P00846 226 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 CDK10Q15131 360 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 C9orf135Q5VTT2 229 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 TMEM236Q5W0B7 351 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 PRSS48Q7RTY5 328 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 DND1Q8IYX4 353 aaKnown RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 GOT1L1Q8NHS2 421 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 C8orf44Q96CB5 159 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 POTEKPQ9BYX7 375 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 TCEAL2Q9H3H9 227 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 ABRACLQ9P1F3 81 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 MAGED1Q9Y5V3 778 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 LPLP06858 475 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 TCTN1Q2MV58 587 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 GCDHQ92947 438 aaPredicted RBP12.9□□□□□ -0.34
CDH1-201ENST00000261769 FUZQ9BT04 418 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 GPR83Q9NYM4 423 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 STUB1Q9UNE7 303 aa12.9□□□□□ -0.34
CDH1-201ENST00000261769 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 MRPS14O60783 128 aaKnown RBP12.89□□□□□ -0.35
CDH1-201ENST00000261769 SCGB2A1O75556 95 aa12.89□□□□□ -0.35
CDH1-201ENST00000261769 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms