RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 CACNA1CQ13936 2221 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 PYCARD-AS1I3L0S3 204 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ERI3O43414 337 aaKnown RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 TBX19O60806 448 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 CDC123O75794 336 aaPredicted RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 SC5DO75845 299 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 PVALBP20472 110 aaPredicted RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 ARL14Q8N4G2 192 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 OR13C2Q8NGS9 318 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 PGLYRP3Q96LB9 341 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 TMEM185BQ9H7F4 350 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 NOX4Q9NPH5 578 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 OPN4Q9UHM6 478 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 SLC6A5Q9Y345 797 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 CTDSPLO15194 276 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 SIGLEC6O43699 453 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ASGR2P07307 311 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ACTC1P68032 377 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ACTA1P68133 377 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 PRKCZQ05513 592 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 FGL1Q08830 312 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 DMKNQ6E0U4 476 aaPredicted RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 RANBP3LQ86VV4 465 aaPredicted RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 PFN4Q8NHR9 129 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 TRAV27A0A087WT01 109 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 SNRPGP15A8MWD9 76 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 PPP1R3DO95685 299 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 DHODHQ02127 395 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ZNF660Q6AZW8 331 aaPredicted RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 ING5Q8WYH8 240 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 EMC8O43402 210 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 GREM1O60565 184 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ZGLP1P0C6A0 271 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 GKN3PP0CG01 181 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 LAMP2P13473 410 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 NT5EP21589 574 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ZNF85Q03923 595 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 OR9A2Q8NGT5 310 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 LCORQ96JN0 433 aaPredicted RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 TIMP4Q99727 224 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ZNF275Q9NSD4 429 aaPredicted RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 CXXC1Q9P0U4 656 aaPredicted RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 OR2M5A3KFT3 312 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 PRSS44E7EML9 344 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 J3QRE1 110 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ACOT7O00154 380 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 RASGRP1O95267 797 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 CYBAP13498 195 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ACHEP22303 614 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 PDX1P52945 283 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 PCGF3Q3KNV8 242 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 SSX6Q7RTT6 188 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ZNF614Q8N883 585 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
SHPK-201ENST00000225519 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 ARSGQ96EG1 525 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 POT1Q9NUX5 634 aa13.16□□□□□ -0.3
SHPK-201ENST00000225519 HMSDA8MTL9 139 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 IFNGP01579 166 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 MPIP34949 423 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
SHPK-201ENST00000225519 TMEM150AQ86TG1 271 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 TMEM25Q86YD3 366 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 DCUN1D3Q8IWE4 304 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 PNPLA2Q96AD5 504 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 DMRTA2Q96SC8 542 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 ZNF471Q9BX82 626 aaPredicted RBP13.15□□□□□ -0.3
SHPK-201ENST00000225519 SLITRK2Q9H156 845 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
SHPK-201ENST00000225519 OR10H1Q9Y4A9 318 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 OR6C65A6NJZ3 312 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 PSMD9O00233 223 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 RBBP9O75884 186 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 OR2A4O95047 310 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 TBX6O95947 436 aaPredicted RBP13.15□□□□□ -0.3
SHPK-201ENST00000225519 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
SHPK-201ENST00000225519 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.3
SHPK-201ENST00000225519 AKR1C2P52895 323 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 SIRPAP78324 504 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 AKR1C1Q04828 323 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 CBFBQ13951 182 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 UBXN2BQ14CS0 331 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
SHPK-201ENST00000225519 OR2A7Q96R45 310 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms