RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SERINC4A6NH21 518 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 G3V2L1 256 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 TEX46H3BTG2 121 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 BPNT1O95861 308 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 UCNP55089 124 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 FAPQ12884 760 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 SEC23BQ15437 767 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 ESCO2Q56NI9 601 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 ABHD17CQ6PCB6 329 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 ZNF813Q6ZN06 617 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 EGLN2Q96KS0 407 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 PLOD2O00469 737 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 PRICKLE3O43900 615 aaPredicted RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 PAHP00439 452 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 FOLR1P15328 257 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 SPINK2P20155 84 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 GABRR1P24046 479 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 NCS1P62166 190 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 PITPNAQ00169 270 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 IL11RAQ14626 422 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 MOB3CQ70IA8 216 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 ASRGL1Q7L266 308 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 CEACAM19Q7Z692 300 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 FGF11Q92914 225 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 GABRG3Q99928 467 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 DHRS4Q9BTZ2 278 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 MAN2C1Q9NTJ4 1040 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 SLC17A4Q9Y2C5 497 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 B3GALT1Q9Y5Z6 326 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 LILRA5A6NI73 299 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 H3BNX3 289 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 SFTPBP07988 381 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 CAPN3P20807 821 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 LGALS4P56470 323 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 SYPL1Q16563 259 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 C3P1Q6ZMU1 363 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 METTL25Q8N6Q8 603 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 ISOC1Q96CN7 298 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 PTBP2Q9UKA9 531 aaKnown RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 ADAM29Q9UKF5 820 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 BAIAP2Q9UQB8 552 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 RPS17P08708 135 aaKnown RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 SFTPCP11686 197 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 NPPBP16860 134 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 MAGEA12P43365 314 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 HES5Q5TA89 166 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 TMEM215Q68D42 235 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 OR4K5Q8NGD3 323 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 TRIOBPQ9H2D6 2365 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 RAC2P15153 192 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 OR1Q1Q15612 314 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 CCDC58Q4VC31 144 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 VASNQ6EMK4 673 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 CYS1Q717R9 158 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 TP53I13Q8NBR0 393 aaPredicted RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 OR5T1Q8NG75 326 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 ABRACLQ9P1F3 81 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 TRBV2A0A0J9YWF9 115 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 OR2W5A6NFC9 320 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 RLN2P04090 185 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 PYCR1P32322 319 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 SNRPD2P62316 118 aaKnown RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 SLC25A25Q6KCM7 469 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 Q6ZPB1 254 aaPredicted RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 SERPINA12Q8IW75 414 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 CISD2Q8N5K1 135 aaKnown RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 DCLRE1CQ96SD1 692 aaKnown RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 P2RY12Q9H244 342 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 SLC6A20Q9NP91 592 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 BTNL2Q9UIR0 455 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
SIX4-201ENST00000216513 MT-ND2P03891 347 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 PSMB10P40306 273 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 TAS2R43P59537 309 aa12.75□□□□□ -0.37
SIX4-201ENST00000216513 SLC2A5P22732 501 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 PAPD5Q8NDF8 572 aaKnown RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 LRR1Q96L50 414 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 OCIAD1Q9NX40 245 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 POMT2Q9UKY4 750 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 CSNK1G3Q9Y6M4 447 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 IGHV1OR21-1A0A087WYE8 117 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 ZNF850A8MQ14 1090 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 SCGB2A1O75556 95 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 CD53P19397 219 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 MOGQ16653 247 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 PMS2CLQ68D20 193 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 SFRP4Q6FHJ7 346 aaPredicted RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 NDNFQ8TB73 568 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 CT55Q8WUE5 264 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms