RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 EMC3Q9P0I2 261 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 FBN1P35555 2871 aaKnown RBP14.02□□□□□ -0.17
ERCC1-201ENST00000013807 INAFM1C9JVW0 142 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 HMGN4O00479 90 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 CLOCKO15516 846 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 ADAM11O75078 769 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 CYP7B1O75881 506 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 LBPP18428 481 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 GGT1P19440 569 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 NTF4P34130 210 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 HTR3AP46098 478 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 PPP2R2BQ00005 443 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 SPANXN4Q5MJ08 99 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 ANKRD46Q86W74 232 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 NEUROG1Q92886 237 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 RAB8BQ92930 207 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 GTPBP3Q969Y2 492 aaKnown RBP14.01□□□□□ -0.17
ERCC1-201ENST00000013807 ARL5BQ96KC2 179 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 MUS81Q96NY9 551 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 TRNT1Q96Q11 434 aaKnown RBP14.01□□□□□ -0.17
ERCC1-201ENST00000013807 TRAF4Q9BUZ4 470 aaPredicted RBP14.01□□□□□ -0.17
ERCC1-201ENST00000013807 SLCO5A1Q9H2Y9 848 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 CTPS2Q9NRF8 586 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.01□□□□□ -0.17
ERCC1-201ENST00000013807 MALT1Q9UDY8 824 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 LIPT1Q9Y234 373 aa14.01□□□□□ -0.17
ERCC1-201ENST00000013807 MAGED1Q9Y5V3 778 aaPredicted RBP14.01□□□□□ -0.17
ERCC1-201ENST00000013807 A0A1W2PP18 115 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 WDR91A4D1P6 747 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 AGAP5A6NIR3 686 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 C9JVG2 144 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 E9PBE3 544 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 ZNF208O43345 1280 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 PCSK6P29122 969 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 MAGEA8P43361 318 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 KHKP50053 298 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 LRRC74AQ0VAA2 488 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 MPP2Q14168 576 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 KRT71Q3SY84 523 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 TNFAIP8L2Q6P589 184 aaPredicted RBP14□□□□□ -0.17
ERCC1-201ENST00000013807 ZNF100Q8IYN0 542 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 KBTBD8Q8NFY9 601 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 PIGXQ8TBF5 258 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 ZNF775Q96BV0 537 aaPredicted RBP14□□□□□ -0.17
ERCC1-201ENST00000013807 ZHX1-C8orf76Q96EF9 292 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 AMBRA1Q9C0C7 1298 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 FAIMQ9NVQ4 179 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 CISD1Q9NZ45 108 aaKnown RBP14□□□□□ -0.17
ERCC1-201ENST00000013807 NPAP1Q9NZP6 1156 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 MARCOQ9UEW3 520 aaPredicted RBP14□□□□□ -0.17
ERCC1-201ENST00000013807 MGAT4BQ9UQ53 548 aa14□□□□□ -0.17
ERCC1-201ENST00000013807 KIAA1324LA8MWY0 1029 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-201ENST00000013807 PDLIM1O00151 329 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 RGS16O15492 202 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-201ENST00000013807 RAMP1O60894 148 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 CPSF4O95639 269 aaKnown RBP13.99□□□□□ -0.17
ERCC1-201ENST00000013807 IGHV4-39P01824 125 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 RPS4Y1P22090 263 aaKnown RBP13.99□□□□□ -0.17
ERCC1-201ENST00000013807 CASP9P55211 416 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 CHRNEQ04844 493 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 FAM174BQ3ZCQ3 159 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 OR7E24Q6IFN5 339 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 ALKBH2Q6NS38 261 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 LRRC74BQ6ZQY2 392 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 ARFGAP2Q8N6H7 521 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 TRIML2Q8N7C3 387 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 ZNF563Q8TA94 476 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 APH1AQ96BI3 265 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 BOD1Q96IK1 185 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 TEX37Q96LM6 180 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 PPP1R36Q96LQ0 422 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 SLC35A5Q9BS91 424 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 REG4Q9BYZ8 158 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 SLC38A1Q9H2H9 487 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 MTHFD2LQ9H903 347 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-201ENST00000013807 TAS2R16Q9NYV7 291 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 TMEM181Q9P2C4 612 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 ADAM21Q9UKJ8 722 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 NOSIPQ9Y314 301 aaKnown RBP13.99□□□□□ -0.17
ERCC1-201ENST00000013807 SLC25A15Q9Y619 301 aa13.99□□□□□ -0.17
ERCC1-201ENST00000013807 EIF1BO60739 113 aaKnown RBP13.98□□□□□ -0.17
ERCC1-201ENST00000013807 CRLF1O75462 422 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 ALDOCP09972 364 aaKnown RBP13.98□□□□□ -0.17
ERCC1-201ENST00000013807 TFPIP10646 304 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 PTAFRP25105 342 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 S100A3P33764 101 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 STX3Q13277 289 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 NRF1Q16656 503 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 TMEM108Q6UXF1 575 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 NUF2Q9BZD4 464 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 ADAM19Q9H013 955 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 PIF1Q9H611 641 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 BARX1Q9HBU1 254 aaPredicted RBP13.98□□□□□ -0.17
ERCC1-201ENST00000013807 AIG1Q9NVV5 245 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 ASB6Q9NWX5 421 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 GPR45Q9Y5Y3 372 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 DNHD1Q96M86 4753 aa13.98□□□□□ -0.17
ERCC1-201ENST00000013807 STAB1Q9NY15 2570 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 CCDC154A6NI56 674 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 CLDN24A6NM45 220 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms