RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 NINQ8N4C6 2090 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ELOA3DA6NLF2 546 aaPredicted RBP13.99□□□□□ -0.17
CLN6-219ENST00000637329 H3BN98 237 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ETV2O00321 342 aaPredicted RBP13.99□□□□□ -0.17
CLN6-219ENST00000637329 PIP5K1CO60331 668 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 MPZL2O60487 215 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 TP53P04637 393 aaPredicted RBP13.99□□□□□ -0.17
CLN6-219ENST00000637329 LIFP15018 202 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 MST1P26927 711 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 PTGDSP41222 190 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 CASP3P42574 277 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ISL1P61371 349 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 C19orf57Q0VDD7 668 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 FOXD4Q12950 439 aaPredicted RBP13.99□□□□□ -0.17
CLN6-219ENST00000637329 PTGES3Q15185 160 aaKnown RBP13.99□□□□□ -0.17
CLN6-219ENST00000637329 MEP1AQ16819 746 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ELOA3BQ3SY89 546 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 BROXQ5VW32 411 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 SLX4IPQ5VYV7 408 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ZNF620Q6ZNG0 422 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 PRICKLE2Q7Z3G6 844 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 TMEM156Q8N614 296 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 CLEC1AQ8NC01 280 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ELOA3Q8NG57 546 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 TEX47Q8TBZ9 253 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 RNF217Q8TC41 542 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 TMEM234Q8WY98 164 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 HDAC2Q92769 488 aaKnown RBP13.99□□□□□ -0.17
CLN6-219ENST00000637329 ZNF566Q969W8 418 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 BPIFA2Q96DR5 249 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 SGCZQ96LD1 299 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 GPA33Q99795 319 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ADAM19Q9H013 955 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 SH2D2AQ9NP31 389 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 HPF1Q9NWY4 346 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 PPP4R1LQ9P1A2 415 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 SCOCQ9UIL1 159 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 BLOC1S6Q9UL45 172 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 CDH10Q9Y6N8 788 aa13.99□□□□□ -0.17
CLN6-219ENST00000637329 ANKRD33BA6NCL7 494 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 SOX14O95416 240 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 NUDT14O95848 222 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 GP1BBP13224 206 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 IFI30P13284 250 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 ITPKBP27987 946 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 EPHA2P29317 976 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 GPR4P46093 362 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 RRADP55042 308 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 LSM11P83369 360 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLN6-219ENST00000637329 IL5RAQ01344 420 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 CD47Q08722 323 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 TOP3AQ13472 1001 aaPredicted RBP13.98□□□□□ -0.17
CLN6-219ENST00000637329 MAD2L1BPQ15013 274 aaPredicted RBP13.98□□□□□ -0.17
CLN6-219ENST00000637329 QPRTQ15274 297 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 COL28A1Q2UY09 1125 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 CRTC2Q53ET0 693 aaPredicted RBP13.98□□□□□ -0.17
CLN6-219ENST00000637329 ACER2Q5QJU3 275 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 RBM48Q5RL73 367 aaKnown RBP13.98□□□□□ -0.17
CLN6-219ENST00000637329 C5orf46Q6UWT4 87 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 RTL4Q6ZR62 310 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 GRINAQ7Z429 371 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 ZNF786Q8N393 782 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 PFN4Q8NHR9 129 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 FAM81AQ8TBF8 368 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 BRIX1Q8TDN6 353 aaKnown RBP13.98□□□□□ -0.17
CLN6-219ENST00000637329 GPR119Q8TDV5 335 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 DUSP19Q8WTR2 217 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 THAP4Q8WY91 577 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 OSTF1Q92882 214 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 NTNG2Q96CW9 530 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 ATP13A2Q9NQ11 1180 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 MEPEQ9NQ76 525 aaPredicted RBP13.98□□□□□ -0.17
CLN6-219ENST00000637329 IMPAD1Q9NX62 359 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 TAS2R10Q9NYW0 307 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 ABI3Q9P2A4 366 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 PCDHGB5Q9Y5G0 923 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 AKAP13Q12802 2813 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 ITPR1Q14643 2758 aa13.98□□□□□ -0.17
CLN6-219ENST00000637329 TRIM64A6NGJ6 449 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 UNC119BA6NIH7 251 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 SLC9A3P48764 834 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 POLR2HP52434 150 aaKnown RBP13.97□□□□□ -0.17
CLN6-219ENST00000637329 MAP2K6P52564 334 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 SMSP52788 366 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 GABARAPL2P60520 117 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 CXCR4P61073 352 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 BLMHQ13867 455 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 TBC1D25Q3MII6 688 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 C12orf73Q69YU5 71 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 FCRLBQ6BAA4 426 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 IL20RBQ6UXL0 311 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 CCDC71Q8IV32 467 aaPredicted RBP13.97□□□□□ -0.17
CLN6-219ENST00000637329 FANK1Q8TC84 345 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 PSMF1Q92530 271 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 THOC3Q96J01 351 aaKnown RBP13.97□□□□□ -0.17
CLN6-219ENST00000637329 ANGPTL4Q9BY76 406 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 LHPPQ9H008 270 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 GALNT9Q9HCQ5 603 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 IL20Q9NYY1 176 aa13.97□□□□□ -0.17
CLN6-219ENST00000637329 IGKV1D-42A0A075B6H8 117 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms