RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 RACK1P63244 317 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ITPRIPL2Q3MIP1 535 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 AMZ1Q400G9 498 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 AADACL4Q5VUY2 407 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SFXN4Q6P4A7 337 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ABHD17CQ6PCB6 329 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZCCHC12Q6PEW1 402 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 BCDIN3DQ7Z5W3 292 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ASPGQ86U10 573 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 KIF18BQ86Y91 864 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SLC38A6Q8IZM9 456 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MMP21Q8N119 569 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR8H3Q8N146 312 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF619Q8N2I2 560 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LSMEM1Q8N8F7 131 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 POMGNT2Q8NAT1 580 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CAMKVQ8NCB2 501 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR4F15Q8NGB8 312 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR8K5Q8NH50 307 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR56B4Q8NH76 319 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SNX33Q8WV41 574 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LCN9Q8WX39 176 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 DIO2Q92813 273 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 RERGQ96A58 199 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ART5Q96L15 291 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 FUZQ9BT04 418 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TRIM2Q9C040 744 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LINC00597Q9H2U6 94 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR52D1Q9H346 318 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PPP1R3EQ9H7J1 279 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SLAMF7Q9NQ25 335 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF275Q9NSD4 429 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SCP2D1Q9UJQ7 156 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CCL26Q9Y258 94 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SLC35A3Q9Y2D2 325 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MRPS7Q9Y2R9 242 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 DOCK9Q9BZ29 2069 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3EA0A087X179 549 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 LOC102723532A0A0G2JNH3 316 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 J3QLW9 94 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PLA2G10O15496 165 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PIP5K1CO60331 668 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PPM1BO75688 479 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 IGHEP01854 428 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 F3P13726 295 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF19P17023 458 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 DNASE1P24855 282 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 MC3RP41968 323 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 GMFBP60983 142 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 BTN3A2P78410 334 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SLC3A1Q07837 685 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 GALEQ14376 348 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 GPR176Q14439 515 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 BCL2L15Q5TBC7 163 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 NIPAL3Q6P499 406 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 POMZP3Q6PJE2 187 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 WASH2PQ6VEQ5 465 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 USP53Q70EK8 1073 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SHFQ7M4L6 423 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 GDF7Q7Z4P5 450 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 MEIOBQ8N635 442 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF366Q8N895 744 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 CDRT4Q8N9R6 151 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 TEX19Q8NA77 164 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 OR5H6Q8NGV6 325 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM239Q8WW34 195 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ELP4Q96EB1 424 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SLC6A18Q96N87 628 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 OR51V1Q9H2C8 321 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 UBQLN3Q9H347 655 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 BRD7Q9NPI1 651 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 MKKSQ9NPJ1 570 aaPredicted RBP3.69□□□□□ -1.82
SCN1A-214ENST00000637038 MGAT4AQ9UM21 535 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 CAMK2AQ9UQM7 478 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 RASD1Q9Y272 281 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SPEF1Q9Y4P9 236 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 CKAP5Q14008 2032 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 C2orf92A0A1B0GVN3 265 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ANKRD61A6NGH8 418 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PRRT4C9JH25 899 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 APODP05090 189 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 TACSTD2P09758 323 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 LINC00271P0C7V0 271 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 AHCYP23526 432 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PTGER4P35408 488 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 OMPP47874 163 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 POLR2GP62487 172 aaKnown RBP eCLIP3.69□□□□□ -1.82
SCN1A-214ENST00000637038 MAP4K2Q12851 820 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF155Q12901 538 aaPredicted RBP3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SNTB2Q13425 540 aaKnown RBP3.69□□□□□ -1.82
SCN1A-214ENST00000637038 DYRK1AQ13627 763 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PRSS53Q2L4Q9 553 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 CDONQ4KMG0 1287 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 PIP5KL1Q5T9C9 394 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SLC23A3Q6PIS1 610 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 SMARCD3Q6STE5 483 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 LRRN1Q6UXK5 716 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF550Q7Z398 422 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 VRK2Q86Y07 508 aa3.69□□□□□ -1.82
SCN1A-214ENST00000637038 ANKRD53Q8N9V6 530 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms