RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 STX11O75558 287 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 DHRS4L1P0CG22 281 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 FAM157CP0CG43 387 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 EDNRAP25101 427 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 SESN3P58005 492 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 SYT14P1Q58G82 188 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 C6orf52Q5T4I8 152 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 C11orf71Q6IPW1 123 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.66■□□□□ 0.58
PNKP-212ENST00000599454 MTDHQ86UE4 582 aaKnown RBP18.66■□□□□ 0.58
PNKP-212ENST00000599454 EIF1ADQ8N9N8 165 aaKnown RBP18.66■□□□□ 0.58
PNKP-212ENST00000599454 OIT3Q8WWZ8 545 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 NANOS1Q8WY41 292 aaKnown RBP18.66■□□□□ 0.58
PNKP-212ENST00000599454 APH1AQ96BI3 265 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 ZNF775Q96BV0 537 aaPredicted RBP18.66■□□□□ 0.58
PNKP-212ENST00000599454 RHOXF2Q9BQY4 288 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 QRSL1Q9H0R6 528 aaKnown RBP18.66■□□□□ 0.58
PNKP-212ENST00000599454 ACER3Q9NUN7 267 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 TMEM160Q9NX00 188 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 GIMAP2Q9UG22 337 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 A0A096LNT2 108 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 SMIM23A6NLE4 172 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 ELOA3DA6NLF2 546 aaPredicted RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 GPR171O14626 319 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 CYP7B1O75881 506 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 CSTAP01040 98 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 SLC25A16P16260 332 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 FKBP2P26885 142 aaKnown RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 IRX1P78414 480 aaPredicted RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 LOXL1Q08397 574 aaPredicted RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 MERTKQ12866 999 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 GPR68Q15743 365 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 TMEM249Q2WGJ8 235 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 ELOA3BQ3SY89 546 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 C6orf136Q5SQH8 315 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 SLC22A25Q6T423 547 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 FBXL14Q8N1E6 418 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 DEPDC4Q8N2C3 294 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 UBE2J2Q8N2K1 259 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 ELOA3Q8NG57 546 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 OR5D16Q8NGK9 328 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 OR5AK3PQ8NH89 298 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 EPS8L3Q8TE67 593 aaKnown RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 TNFRSF13CQ96RJ3 184 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 C1orf50Q9BV19 199 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 DUSP26Q9BV47 211 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 POU2F3Q9UKI9 436 aa18.65■□□□□ 0.58
PNKP-212ENST00000599454 NOSIPQ9Y314 301 aaKnown RBP18.65■□□□□ 0.58
PNKP-212ENST00000599454 CIB4A0PJX0 185 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 FAM234BA2RU67 622 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 E7EQL1 145 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 ANKRD28O15084 1053 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 DNPH1O43598 174 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 GPRIN2O60269 458 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 RAD51DO75771 328 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 MATN1P21941 496 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 CD40P25942 277 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 ALDH3A1P30838 453 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 SOAT1P35610 550 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 SERPINB5P36952 375 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 APOBEC1P41238 236 aaKnown RBP18.64■□□□□ 0.57
PNKP-212ENST00000599454 HBA1P69905 142 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 VLDLRP98155 873 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 RAB35Q15286 201 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 ARHGAP11BQ3KRB8 267 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 IL23RQ5VWK5 629 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 OR7E24Q6IFN5 339 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 EIF3MQ7L2H7 374 aaKnown RBP18.64■□□□□ 0.57
PNKP-212ENST00000599454 RIMKLAQ8IXN7 391 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 GSPT2Q8IYD1 628 aaKnown RBP18.64■□□□□ 0.57
PNKP-212ENST00000599454 MUC15Q8N387 334 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 KRTCAP2Q8N6L1 136 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 FNDC5Q8NAU1 212 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 KIF18AQ8NI77 898 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 PIGXQ8TBF5 258 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 APOPT1Q96IL0 206 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 ZNF350Q9GZX5 532 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 EXD2Q9NVH0 621 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 ASB6Q9NWX5 421 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 TAS2R16Q9NYV7 291 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 KCNE5Q9UJ90 142 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 SLC25A15Q9Y619 301 aa18.64■□□□□ 0.57
PNKP-212ENST00000599454 H7C417 338 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 UGT2B17O75795 530 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 SLU7O95391 586 aaKnown RBP18.63■□□□□ 0.57
PNKP-212ENST00000599454 GUSBP08236 651 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 UBTFL6P0CB48 400 aaPredicted RBP18.63■□□□□ 0.57
PNKP-212ENST00000599454 TFPIP10646 304 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 PTNP21246 168 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 SLC16A1P53985 500 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 C1QTNF12Q5T7M4 302 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 ZNF544Q6NX49 715 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 C6orf120Q7Z4R8 191 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 SLC35G5Q96KT7 338 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 LPAR3Q9UBY5 353 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 MALT1Q9UDY8 824 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 SLC35A3Q9Y2D2 325 aa18.63■□□□□ 0.57
PNKP-212ENST00000599454 HDGFL3Q9Y3E1 203 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms