RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 SPANXN4Q5MJ08 99 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 OGFOD2Q6N063 350 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 C6orf120Q7Z4R8 191 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 ATG4DQ86TL0 474 aaPredicted RBP11.08□□□□□ -0.64
TRIM28-212ENST00000597995 P2RY8Q86VZ1 359 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 ANKRD46Q86W74 232 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 PHC2Q8IXK0 858 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 ZNF619Q8N2I2 560 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 PHOSPHO1Q8TCT1 267 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 MGARPQ8TDB4 240 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 ADAMTS15Q8TE58 950 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 ZFP90Q8TF47 636 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 TESCQ96BS2 214 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 MUCL1Q96DR8 90 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 CHMP6Q96FZ7 201 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 RADILQ96JH8 1075 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 MRGPRX4Q96LA9 322 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 SDF2Q99470 211 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 RHNO1Q9BSD3 238 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 DPY30Q9C005 99 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 COQ10BQ9H8M1 238 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 KCNE5Q9UJ90 142 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 FAF1Q9UNN5 650 aaPredicted RBP11.08□□□□□ -0.64
TRIM28-212ENST00000597995 ALPK2Q86TB3 2170 aa11.08□□□□□ -0.64
TRIM28-212ENST00000597995 GOLGA8QA0A0J9YX86 632 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 GOLGA8OA6NCC3 632 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 C9JVG2 144 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 GOLGA8NF8WBI6 632 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 NDUFS7O75251 213 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 PGM3O95394 542 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 PRKCAP17252 672 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 ENPP1P22413 925 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 SOAT1P35610 550 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 SLC18A1P54219 525 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 ATP12AP54707 1039 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 CASP9P55211 416 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 DSCR9P59020 149 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 SELENBP1Q13228 472 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 CASP8Q14790 479 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 PPA1Q15181 289 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 TOMM34Q15785 309 aaPredicted RBP11.07□□□□□ -0.64
TRIM28-212ENST00000597995 TIMM23BQ5SRD1 257 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 AGAP6Q5VW22 663 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 MAVSQ7Z434 540 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 LRRC34Q8IZ02 419 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 GPR119Q8TDV5 335 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 ARL8AQ96BM9 186 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 MOAP1Q96BY2 351 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 PSD2Q9BQI7 771 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 WDR55Q9H6Y2 383 aaPredicted RBP11.07□□□□□ -0.64
TRIM28-212ENST00000597995 THAP1Q9NVV9 213 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 GDF2Q9UK05 429 aaPredicted RBP11.07□□□□□ -0.64
TRIM28-212ENST00000597995 ING1Q9UK53 422 aaPredicted RBP11.07□□□□□ -0.64
TRIM28-212ENST00000597995 CARD8Q9Y2G2 431 aa11.07□□□□□ -0.64
TRIM28-212ENST00000597995 RNF103-CHMP3A0A140T963 221 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 PRSS51A0A1B0GVH4 220 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 ZNF724A8MTY0 619 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 GTPBP1O00178 669 aaKnown RBP11.06□□□□□ -0.64
TRIM28-212ENST00000597995 ETV2O00321 342 aaPredicted RBP11.06□□□□□ -0.64
TRIM28-212ENST00000597995 EIF4E2O60573 245 aaKnown RBP11.06□□□□□ -0.64
TRIM28-212ENST00000597995 FCMRO60667 390 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 CYTIPO60759 359 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 RAMP1O60894 148 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 KRT16P08779 473 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 FAM157CP0CG43 387 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 MATN1P21941 496 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 EPHA3P29320 983 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 SLC7A1P30825 629 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 NME5P56597 212 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 UFM1P61960 85 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 RASGEF1BQ0VAM2 473 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 OR10H5Q8NGA6 315 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 OR4A15Q8NGL6 344 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 MIPOL1Q8TD10 442 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 ADAD1Q96M93 576 aaKnown RBP11.06□□□□□ -0.64
TRIM28-212ENST00000597995 AIG1Q9NVV5 245 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 MARCOQ9UEW3 520 aaPredicted RBP11.06□□□□□ -0.64
TRIM28-212ENST00000597995 PRSS50Q9UI38 385 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 B3GALT5Q9Y2C3 310 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 DTNAQ9Y4J8 743 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 GPR45Q9Y5Y3 372 aa11.06□□□□□ -0.64
TRIM28-212ENST00000597995 A0A096LNT2 108 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 IGHV3-15A0A0B4J1V0 119 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 PRAMEF27A3QJZ7 478 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 HDAC3O15379 428 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 SSX4O60224 188 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 LYZL6O75951 148 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 CPSF4O95639 269 aaKnown RBP11.05□□□□□ -0.64
TRIM28-212ENST00000597995 OR12D1P0DN82 309 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 KITP10721 976 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 GGT1P19440 569 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 COX5AP20674 150 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 IGHV1-2P23083 117 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 CDH11P55287 796 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 FUT5Q11128 374 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 STK11Q15831 433 aa11.05□□□□□ -0.64
TRIM28-212ENST00000597995 MAPK14Q16539 360 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms