RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MOAP1Q96BY2 351 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 PAIP2Q9BPZ3 127 aaKnown RBP13.06□□□□□ -0.32
PNKP-202ENST00000593706 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 HOXD1Q9GZZ0 328 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 AIG1Q9NVV5 245 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 CISD1Q9NZ45 108 aaKnown RBP13.06□□□□□ -0.32
PNKP-202ENST00000593706 ICAM5Q9UMF0 924 aa13.06□□□□□ -0.32
PNKP-202ENST00000593706 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
PNKP-202ENST00000593706 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 KLF11O14901 512 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 HDAC3O15379 428 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 EFNA2O43921 213 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 NDUFS7O75251 213 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 KRT16P08779 473 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 PRKCAP17252 672 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 ENPP1P22413 925 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 OR3A2P47893 321 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 RPS26P62854 115 aaKnown RBP13.05□□□□□ -0.32
PNKP-202ENST00000593706 TOMM34Q15785 309 aaPredicted RBP13.05□□□□□ -0.32
PNKP-202ENST00000593706 NRF1Q16656 503 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 PGS1Q32NB8 556 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.05□□□□□ -0.32
PNKP-202ENST00000593706 C3orf33Q6P1S2 294 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 TOR1AIP2Q8NFQ8 470 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 OR5AK3PQ8NH89 298 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 MIPOL1Q8TD10 442 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 ARL8AQ96BM9 186 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 MUCL1Q96DR8 90 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 MAELQ96JY0 434 aaKnown RBP13.05□□□□□ -0.32
PNKP-202ENST00000593706 PSD2Q9BQI7 771 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 TRAF4Q9BUZ4 470 aaPredicted RBP13.05□□□□□ -0.32
PNKP-202ENST00000593706 BCO1Q9HAY6 547 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 PRSS50Q9UI38 385 aa13.05□□□□□ -0.32
PNKP-202ENST00000593706 GDF2Q9UK05 429 aaPredicted RBP13.05□□□□□ -0.32
PNKP-202ENST00000593706 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 NBEAL1Q6ZS30 2694 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 DPRXA6NFQ7 191 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 ZNF814B7Z6K7 855 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 ABCD4O14678 606 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 SSX4O60224 188 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 RAMP1O60894 148 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 UBL4AP11441 157 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 EPHA3P29320 983 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 IL12AP29459 219 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 NUDT6P53370 316 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 RAC3P60763 192 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 RASGEF1BQ0VAM2 473 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 CBFBQ13951 182 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 DPY19L1Q2PZI1 675 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 CHRFAM7AQ494W8 412 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 SPANXN4Q5MJ08 99 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 AGBL2Q5U5Z8 902 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 SEZ6L2Q6UXD5 910 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.04□□□□□ -0.32
PNKP-202ENST00000593706 HIPK1Q86Z02 1210 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 CLEC4FQ8N1N0 589 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 OR5D16Q8NGK9 328 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 GPR119Q8TDV5 335 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 OR5B2Q96R09 309 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 OR7D2Q96RA2 312 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 DPY30Q9C005 99 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 WDR55Q9H6Y2 383 aaPredicted RBP13.04□□□□□ -0.32
PNKP-202ENST00000593706 MANSC1Q9H8J5 431 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 MARCOQ9UEW3 520 aaPredicted RBP13.04□□□□□ -0.32
PNKP-202ENST00000593706 GPR45Q9Y5Y3 372 aa13.04□□□□□ -0.32
PNKP-202ENST00000593706 RNF103-CHMP3A0A140T963 221 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 PRSS51A0A1B0GVH4 220 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 A8MV72 311 aaPredicted RBP13.03□□□□□ -0.32
PNKP-202ENST00000593706 C9JVG2 144 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 E9PBE3 544 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 ZNF264O43296 627 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 GGT1P19440 569 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 SOAT1P35610 550 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 CLNS1AP54105 237 aaKnown RBP13.03□□□□□ -0.32
PNKP-202ENST00000593706 ATP12AP54707 1039 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 UFM1P61960 85 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 QPRTQ15274 297 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 FAM174BQ3ZCQ3 159 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 AGAP6Q5VW22 663 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 AP1ARQ63HQ0 302 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 SSX8Q7RTT4 187 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 SPATA19Q7Z5L4 167 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 ANKRD46Q86W74 232 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 ZNF100Q8IYN0 542 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 ZNF775Q96BV0 537 aaPredicted RBP13.03□□□□□ -0.32
PNKP-202ENST00000593706 ADAD1Q96M93 576 aaKnown RBP13.03□□□□□ -0.32
PNKP-202ENST00000593706 CCDC115Q96NT0 180 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 ZNF300Q96RE9 604 aaPredicted RBP13.03□□□□□ -0.32
PNKP-202ENST00000593706 RHNO1Q9BSD3 238 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 POU2F3Q9UKI9 436 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 DTNAQ9Y4J8 743 aa13.03□□□□□ -0.32
PNKP-202ENST00000593706 CENPVL1A0A0U1RR11 272 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 SHISA9B4DS77 424 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.33
PNKP-202ENST00000593706 CFLARO15519 480 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms