RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-209	ENST00000589214	ZNF239	Q16600	458 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	GCNT6	Q5T4J0	391 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	MRPL2	Q5T653	305 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	ZNF836	Q6ZNA1	936 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	FAM214B	Q7L5A3	538 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	DPP10	Q8N608	796 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	ZNF563	Q8TA94	476 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	MRGPRX4	Q96LA9	322 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	CGREF1	Q99674	301 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	ELAC2	Q9BQ52	826 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	SRXN1	Q9BYN0	137 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	THUMPD1	Q9NXG2	353 aa	Known RBP	13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	CALML5	Q9NZT1	146 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	EMC9	Q9Y3B6	208 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	DSPP	Q9NZW4	1301 aa		13.61	□□□□□ -0.23
ERCC1-209	ENST00000589214	MPDZ	O75970	2070 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214		A0A0G2JPF8	293 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	FAM221A	A4D161	298 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	GJE1	A6NN92	205 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	HNRNPCL2	B2RXH8	293 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	HNRNPCL3	B7ZW38	293 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	HNRNPCL1	O60812	293 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	DNAJA2	O60884	412 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	SS18L1	O75177	396 aa	Predicted RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	PGM3	O95394	542 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	NTN1	O95631	604 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CGA	P01215	116 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	GKN3P	P0CG01	181 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	HNRNPCL4	P0DMR1	293 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ARAF	P10398	606 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CD8B	P10966	210 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	NID1	P14543	1247 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	POU2F1	P14859	743 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	PPIB	P23284	216 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	DNAJA1	P31689	397 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CCKAR	P32238	428 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CD79B	P40259	229 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	KCNJ5	P48544	419 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	IDH2	P48735	452 aa	Known RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CTBP2	P56545	445 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	MERTK	Q12866	999 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	GNA13	Q14344	377 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	DAZAP2	Q15038	168 aa	Predicted RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	EXOC3L2	Q2M3D2	409 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	SLC25A53	Q5H9E4	307 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	SNX32	Q86XE0	403 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CDC20B	Q86Y33	519 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	CLIP4	Q8N3C7	705 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ZNF610	Q8N9Z0	462 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	OR6K3	Q8NGY3	331 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	TSPEAR	Q8WU66	669 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	OIT3	Q8WWZ8	545 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ROBO4	Q8WZ75	1007 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	OSTF1	Q92882	214 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ANKRD27	Q96NW4	1050 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	COQ10B	Q9H8M1	238 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ACER3	Q9NUN7	267 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	TESMIN	Q9Y4I5	508 aa		13.6	□□□□□ -0.23
ERCC1-209	ENST00000589214	POLQ	O75417	2590 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214		A0A1W2PNR3	127 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	GPX2	P18283	190 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CCNA2	P20248	432 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	SLC7A1	P30825	629 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CARD18	P57730	90 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CDK6	Q00534	326 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	ADRM1	Q16186	407 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	MMEL1	Q495T6	779 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	LIN52	Q52LA3	116 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	C3orf33	Q6P1S2	294 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	PLEKHM3	Q6ZWE6	761 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	POU5F2	Q8N7G0	328 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	ABHD3	Q8WU67	409 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	ST8SIA1	Q92185	356 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	PMM1	Q92871	262 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CPNE4	Q96A23	557 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	DNAJA3	Q96EY1	480 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	REXO5	Q96IC2	774 aa	Known RBP	13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	DACH2	Q96NX9	599 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	SLC39A3	Q9BRY0	314 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	LIME1	Q9H400	295 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	PIF1	Q9H611	641 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	EXOSC3	Q9NQT5	275 aa	Known RBP	13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CTPS2	Q9NRF8	586 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	KLHL28	Q9NXS3	571 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	NDRG3	Q9UGV2	375 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CHST2	Q9Y4C5	530 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CAPN7	Q9Y6W3	813 aa		13.59	□□□□□ -0.23
ERCC1-209	ENST00000589214	CDHR4	A6H8M9	788 aa		13.58	□□□□□ -0.24
ERCC1-209	ENST00000589214	ETV2	O00321	342 aa	Predicted RBP	13.58	□□□□□ -0.24
ERCC1-209	ENST00000589214	FRS3	O43559	492 aa		13.58	□□□□□ -0.24
ERCC1-209	ENST00000589214	PRG2	P13727	222 aa		13.58	□□□□□ -0.24
ERCC1-209	ENST00000589214	DRD4	P21917	467 aa		13.58	□□□□□ -0.24
ERCC1-209	ENST00000589214	AQP1	P29972	269 aa		13.58	□□□□□ -0.24
ERCC1-209	ENST00000589214	AGTR1	P30556	359 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms