RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GLSO94925 669 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RFPL3SP0C7P2 107 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PRKCAP17252 672 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 LIMS1P48059 325 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SPIBQ01892 262 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 DGCR6Q14129 220 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZNF169Q14929 603 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TRAM2Q15035 370 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PLPPR5Q32ZL2 321 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC25A53Q5H9E4 307 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 LINC00114Q6XXX2 140 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ASB18Q6ZVZ8 466 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZFP62Q8NB50 900 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OR4C15Q8NGM1 316 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM234Q8WY98 164 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ST8SIA1Q92185 356 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 C3orf49Q96BT1 292 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PRSS27Q9BQR3 290 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 UBQLN3Q9H347 655 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 REEP1Q9H902 201 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MAN2C1Q9NTJ4 1040 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 VNN3Q9NY84 501 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TP53TG5Q9Y2B4 290 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 LYVE1Q9Y5Y7 322 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RELNP78509 3460 aa14.83□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FAM47E-STBD1D6RA91 191 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TNFRSF11BO00300 401 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GADD45GO95257 159 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 NTN1O95631 604 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 DPP4P27487 766 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SRD5A2P31213 254 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 DNAJA1P31689 397 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZNF41P51814 821 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC34A1Q06495 639 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FOXD4Q12950 439 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PPP1R8Q12972 351 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GK3PQ14409 553 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GLYR1Q49A26 553 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ALG10BQ5I7T1 473 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GRINAQ7Z429 371 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM179BQ7Z7N9 219 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 NKAIN4Q8IVV8 208 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OR52J3Q8NH60 311 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 POC1BQ8TC44 478 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC38A4Q969I6 547 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 EPYCQ99645 322 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FUZQ9BT04 418 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TTTY12Q9BZ98 90 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ANKRD19PQ9H560 264 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 C12orf10Q9HB07 376 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SELENONQ9NZV5 590 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC7A7Q9UM01 511 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 VDAC3Q9Y277 283 aa14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SAMHD1Q9Y3Z3 626 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-228ENST00000583363 A0A087WUJ7 227 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TRBV4-1A0A0J9YWV2 114 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 CHP2O43745 196 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 HK1P19367 917 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TACR3P29371 465 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 HTR3AP46098 478 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 IST1P53990 364 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PLGLB1Q02325 96 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM44Q2T9K0 475 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PLEKHN1Q494U1 663 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 DCST1Q5T197 706 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SWT1Q5T5J6 900 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RPUSD3Q6P087 351 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PODNL1Q6PEZ8 512 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ATG4DQ86TL0 474 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ADGRG3Q86Y34 549 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FAM98AQ8NCA5 519 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OR5K1Q8NHB7 308 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 C9orf43Q8TAL5 461 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZBTB8AQ96BR9 441 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 DTNBP1Q96EV8 351 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 NRBF2Q96F24 287 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MPP4Q96JB8 637 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MRGPRX4Q96LA9 322 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ALPK1Q96QP1 1244 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 NPAS1Q99742 590 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MFRPQ9BY79 579 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZNF71Q9NQZ8 489 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OSGIN1Q9UJX0 560 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 B3GNT3Q9Y2A9 372 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 U3KQV3 271 aa14.81□□□□□ -0.04
CDK5RAP3-228ENST00000583363 C7orf72A4D263 438 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 HPNP05981 417 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PNMTP11086 282 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FPR1P21462 350 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ADH6P28332 368 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RFC3P40938 356 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 APOBEC1P41238 236 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 EIF1P41567 113 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 POLR2HP52434 150 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PPIAP62937 165 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FOXK1P85037 733 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MERTKQ12866 999 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 EXOC3L2Q2M3D2 409 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FBXW10Q5XX13 1052 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SHQ1Q6PI26 577 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms