RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SLITRK5O94991 958 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PRG2P13727 222 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TRHRP34981 398 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZNF404Q494X3 552 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 FLYWCH1Q4VC44 716 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 CDCP2Q5VXM1 449 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 MED25Q71SY5 747 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PEX5LQ8IYB4 626 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZNF486Q96H40 463 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 FAM46AQ96IP4 442 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 STACQ99469 402 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 LMF2Q9BU23 707 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 STRADBQ9C0K7 418 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TP63Q9H3D4 680 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 EXOSC4Q9NPD3 245 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 AKAP7Q9P0M2 348 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 COL27A1Q8IZC6 1860 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ISPDA4D126 451 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 A6NL46 340 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 CTDSP2O14595 271 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 KLF7O75840 302 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 DLGAP3O95886 979 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 HBQ1P09105 142 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 E2F1Q01094 437 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PLAURQ03405 335 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 SNAPC1Q16533 368 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 NDUFAF6Q330K2 333 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ENTPD8Q5MY95 495 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PDZK1Q5T2W1 519 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 STEAP3Q658P3 488 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PLAG1Q6DJT9 500 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZCCHC12Q6PEW1 402 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 FAM198BQ6UWH4 519 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZNF836Q6ZNA1 936 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 BCORP1Q8N888 145 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 MORN4Q8NDC4 146 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 OR8J1Q8NGP2 316 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 MCHR1Q99705 422 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 FUZQ9BT04 418 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 NDEL1Q9GZM8 345 aa11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PTRH2Q9Y3E5 179 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-217ENST00000580287 SYNDIG1LA6NDD5 238 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 AGAP5A6NIR3 686 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PLD2O14939 933 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PRKYO43930 277 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 BRINP1O60477 761 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 CASP3P42574 277 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 NR0B1P51843 470 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TEKQ02763 1124 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ST3GAL3Q11203 375 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TRAM2Q15035 370 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 SSX1Q16384 188 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PRAMEF8Q5VWM4 474 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PRAMEF7Q5VXH5 474 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ACSM5Q6NUN0 579 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PRICKLE2Q7Z3G6 844 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 POC5Q8NA72 575 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 GATSQ8NAP1 163 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TEX47Q8TBZ9 253 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 METTL21AQ8WXB1 218 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 HOXB13Q92826 284 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 DAZLQ92904 295 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TRMT61AQ96FX7 289 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 MGLLQ99685 303 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 WDR77Q9BQA1 342 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 Q9N2J8 555 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 C14orf119Q9NWQ9 140 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZNF223Q9UK11 482 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 CBLCQ9ULV8 474 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZNF443Q9Y2A4 671 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 GPR52Q9Y2T5 361 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 C2orf92A0A1B0GVN3 265 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 METTL15A6NJ78 407 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 B4E171 279 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 SYT5O00445 386 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 NDUFB5O43674 189 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 KIAA0513O60268 411 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 AGR2O95994 175 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 UMODP07911 640 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 CELA2AP08217 269 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 GPR143P51810 404 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 COX10Q12887 443 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 LARS2Q15031 903 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 MRPL2Q5T653 305 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 C12orf73Q69YU5 71 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 PAPD4Q6PIY7 484 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 VASH1Q7L8A9 365 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 BPHLQ86WA6 291 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ZNF619Q8N2I2 560 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 OR1N1Q8NGS0 311 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TMEM203Q969S6 136 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 ADIPOR1Q96A54 375 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 LRR1Q96L50 414 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 TSSK6Q9BXA6 273 aa11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 MOV10Q9HCE1 1003 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 CNOT2Q9NZN8 540 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-217ENST00000580287 IL20RAQ9UHF4 553 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms