RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 AKAP1Q92667 903 aaKnown RBP eCLIP18.34■□□□□ 0.536e-7■■■■□ 24.1
LITAF-205ENST00000570904 KISS1RQ969F8 398 aaPredicted RBP18.34■□□□□ 0.53
LITAF-205ENST00000570904 CCDC115Q96NT0 180 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 HDHD5Q9BXW7 423 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 GSX2Q9BZM3 304 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 SAP130Q9H0E3 1048 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 CTPS2Q9NRF8 586 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 POLE3Q9NRF9 147 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 SERINC1Q9NRX5 453 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 AIG1Q9NVV5 245 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 PRSS50Q9UI38 385 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 SLC35A3Q9Y2D2 325 aa18.34■□□□□ 0.53
LITAF-205ENST00000570904 USF3Q68DE3 2245 aa18.33■□□□□ 0.53
LITAF-205ENST00000570904 CLDN24A6NM45 220 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 HMGN4O00479 90 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 SMAD7O15105 426 aaKnown RBP18.33■□□□□ 0.52
LITAF-205ENST00000570904 IL12AP29459 219 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 OR3A2P47893 321 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 DIO1P49895 249 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 HPCAP84074 193 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 PLAURQ03405 335 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 CHRNEQ04844 493 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 GPAT3Q53EU6 434 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 SYT14P1Q58G82 188 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 TMPPEQ6ZT21 453 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 ATG4DQ86TL0 474 aaPredicted RBP18.33■□□□□ 0.52
LITAF-205ENST00000570904 RNF130Q86XS8 419 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 ZNF563Q8TA94 476 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 TMEM171Q8WVE6 324 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 DNAJA3Q96EY1 480 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 BTNL2Q9UIR0 455 aa18.33■□□□□ 0.52
LITAF-205ENST00000570904 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 SULT2B1O00204 365 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 ZNF500O60304 480 aaPredicted RBP18.32■□□□□ 0.52
LITAF-205ENST00000570904 GUSBP08236 651 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 TFPIP10646 304 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 WDR4P57081 412 aaKnown RBP18.32■□□□□ 0.52
LITAF-205ENST00000570904 ITGADQ13349 1161 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 CAPRIN1Q14444 709 aaKnown RBP18.32■□□□□ 0.52
LITAF-205ENST00000570904 BHLHA15Q7RTS1 189 aaPredicted RBP18.32■□□□□ 0.52
LITAF-205ENST00000570904 ZNF611Q8N823 705 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 ANKFN1Q8N957 763 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 MGARPQ8TDB4 240 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 ZNF75CPQ92670 426 aaPredicted RBP18.32■□□□□ 0.52
LITAF-205ENST00000570904 INPP5KQ9BT40 448 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 CCDC106Q9BWC9 280 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 WDR55Q9H6Y2 383 aaPredicted RBP18.32■□□□□ 0.52
LITAF-205ENST00000570904 RNF115Q9Y4L5 304 aa18.32■□□□□ 0.52
LITAF-205ENST00000570904 CCDC154A6NI56 674 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 CLOCKO15516 846 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 ADAM11O75078 769 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 LYZL6O75951 148 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 LY6G6DO95868 133 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 HEXAP06865 529 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 EPHA3P29320 983 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 APOBEC1P41238 236 aaKnown RBP18.31■□□□□ 0.52
LITAF-205ENST00000570904 CDKN2CP42773 168 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 CSNK2A1P68400 391 aaPredicted RBP18.31■□□□□ 0.52
LITAF-205ENST00000570904 KCNJ10P78508 379 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 P2RY6Q15077 328 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 SYPL1Q16563 259 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 ABLIM2Q6H8Q1 611 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 Q6ZT83 130 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 SLC25A43Q8WUT9 341 aaPredicted RBP18.31■□□□□ 0.52
LITAF-205ENST00000570904 OIT3Q8WWZ8 545 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 HSD17B8Q92506 261 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 CNOT9Q92600 299 aaKnown RBP18.31■□□□□ 0.52
LITAF-205ENST00000570904 PANX1Q96RD7 426 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 POTEKPQ9BYX7 375 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 CXorf56Q9H5V9 222 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.31■□□□□ 0.52
LITAF-205ENST00000570904 CHRNA9Q9UGM1 479 aa18.31■□□□□ 0.52
LITAF-205ENST00000570904 SPIN1Q9Y657 262 aaPredicted RBP18.31■□□□□ 0.52
LITAF-205ENST00000570904 ZANQ9Y493 2812 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 TMEM120BA0PK00 339 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 ZNF724A8MTY0 619 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 GSNP06396 782 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 PGRP06401 933 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 CHRM4P08173 479 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 KITP10721 976 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 STK11Q15831 433 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 NCMAPQ5T1S8 102 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 AP1ARQ63HQ0 302 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 SEZ6L2Q6UXD5 910 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 GRINAQ7Z429 371 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 SPATA19Q7Z5L4 167 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 GALNT5Q7Z7M9 940 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 CROCCP2Q86T23 111 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 ARFGAP2Q8N6H7 521 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 LILRB1Q8NHL6 650 aaPredicted RBP18.3■□□□□ 0.52
LITAF-205ENST00000570904 PNPT1Q8TCS8 783 aaKnown RBP18.3■□□□□ 0.52
LITAF-205ENST00000570904 NEUROG1Q92886 237 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 ARL5BQ96KC2 179 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 OR52E6Q96RD3 313 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 BDH2Q9BUT1 245 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 OR11A1Q9GZK7 315 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 SLC38A1Q9H2H9 487 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 EXOSC3Q9NQT5 275 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms