RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 A0A1B0GTH9 108 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 TCRBV3S1A0A5B6 114 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 TRAPPC13A5PLN9 417 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 LINC01387J3KSC0 135 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 SUSD5O60279 629 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 WISP2O76076 250 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 DIRAS1O95057 198 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 MT-ND1P03886 318 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 OPN1LWP04000 364 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 RAP2AP10114 183 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 TFPIP10646 304 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 PEPDP12955 493 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF17P17021 662 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 POU3F2P20265 443 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-204ENST00000559931 STARP49675 285 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 VLDLRP98155 873 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 HSF1Q00613 529 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 PIN1Q13526 163 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-204ENST00000559931 CCNIQ14094 377 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 SLC25A53Q5H9E4 307 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ALG10BQ5I7T1 473 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF324BQ6AW86 544 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ARHGAP11AQ6P4F7 1023 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF613Q6PF04 617 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 GFRALQ6UXV0 394 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 PRICKLE2Q7Z3G6 844 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ADGRG5Q8IZF4 528 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 GHDCQ8N2G8 530 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ADAMTS16Q8TE57 1224 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 SLC41A3Q96GZ6 507 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 TMEM185BQ9H7F4 350 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 IL1RAPQ9NPH3 570 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 RHCGQ9UBD6 479 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 RIMS3Q9UJD0 308 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 SLC7A7Q9UM01 511 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 TMED7Q9Y3B3 224 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 ZGRF1Q86YA3 2104 aa12.97□□□□□ -0.33
SMAD6-204ENST00000559931 C7orf72A4D263 438 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 B8ZZF3 427 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 NPIPA2E9PIF3 369 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 NPIPA3F8WFD2 350 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 J3KTA2 159 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 ACTL6AO96019 429 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 IGHG3P01860 377 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 PNMTP11086 282 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 BMP7P18075 431 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 RHCEP18577 417 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 CHMP24386 653 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 CDH12P55289 794 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 B3GALT5-AS1P59052 145 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 SRYQ05066 204 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 C19orf57Q0VDD7 668 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 ADGRG3Q86Y34 549 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 UBQLNLQ8IYU4 475 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 LILRA2Q8N149 483 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 C3orf49Q96BT1 292 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 SARAFQ96BY9 339 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 C7orf34Q96L11 122 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF300Q96RE9 604 aaPredicted RBP12.96□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF347Q96SE7 839 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 CHID1Q9BWS9 393 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 POLR2J2Q9GZM3 115 aaKnown RBP12.96□□□□□ -0.33
SMAD6-204ENST00000559931 POLR2J3Q9H1A7 115 aaKnown RBP12.96□□□□□ -0.33
SMAD6-204ENST00000559931 DENND2DQ9H6A0 471 aaPredicted RBP12.96□□□□□ -0.33
SMAD6-204ENST00000559931 YY1AP1Q9H869 796 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 ALKBH4Q9NXW9 302 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 NDUFAF4Q9P032 175 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 TNFRSF10DQ9UBN6 386 aa12.96□□□□□ -0.33
SMAD6-204ENST00000559931 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.33
SMAD6-204ENST00000559931 MPDZO75970 2070 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 A0A0B4J2E0 115 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 A0A1B0GX12 115 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 GJE1A6NN92 205 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 AQP7O14520 342 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 GNGT2O14610 69 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 ZNHIT1O43257 154 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 SEC14L5O43304 696 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 OR5F1O95221 314 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 WISP1O95388 367 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 NTN1O95631 604 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 SEMG1P04279 462 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 HOXB6P17509 224 aaKnown RBP12.95□□□□□ -0.34
SMAD6-204ENST00000559931 IL11P20809 199 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 SFTPDP35247 375 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 PTGS2P35354 604 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 GFRA1P56159 465 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 ACTR3P61158 418 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 RAC1P63000 192 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 RBPJQ06330 500 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 ST3GAL3Q11203 375 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 TMEM44Q2T9K0 475 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 TMEM176BQ3YBM2 270 aaPredicted RBP12.95□□□□□ -0.34
SMAD6-204ENST00000559931 GDF7Q7Z4P5 450 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 PIP5K1AQ99755 562 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms