RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ATP6V1C2Q8NEY4 427 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 BHLHE22Q8NFJ8 381 aaPredicted RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 OR8J3Q8NGG0 315 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 FNDC9Q8TBE3 224 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SLC25A43Q8WUT9 341 aaPredicted RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 FIG4Q92562 907 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SLC35B4Q969S0 331 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 CPNE4Q96A23 557 aaPredicted RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 ADAM19Q9H013 955 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 PIGMQ9H3S5 423 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 GLRX2Q9NS18 164 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 JKAMPQ9P055 326 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 ARMCX1Q9P291 453 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 FOXD3Q9UJU5 478 aaPredicted RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 MCTS1Q9ULC4 181 aaKnown RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 SPIN1Q9Y657 262 aaPredicted RBP9.59□□□□□ -0.87
LINC00239-201ENST00000556973 ICE1Q9Y2F5 2266 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 MED12LQ86YW9 2145 aa9.59□□□□□ -0.87
LINC00239-201ENST00000556973 TNFSF13O75888 250 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 GKN3PP0CG01 181 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 SHC1P29353 583 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 SLC7A1P30825 629 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 PEX19P40855 299 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 ACAA2P42765 397 aaKnown RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 CLK1P49759 484 aaKnown RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 ASCL1P50553 236 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 POLR2HP52434 150 aaKnown RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 RAC3P60763 192 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 COPZ1P61923 177 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 SELPLGQ14242 412 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 CYP51A1Q16850 503 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 NET1Q7Z628 596 aaPredicted RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 ADGRG3Q86Y34 549 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 PTOV1Q86YD1 416 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 GCNT2Q8N0V5 402 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 ACBD4Q8NC06 268 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 OR10A6Q8NH74 314 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 RNASE6Q93091 150 aaKnown RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 REXO5Q96IC2 774 aaKnown RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 ECSITQ9BQ95 431 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 TRIM8Q9BZR9 551 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 FAM107BQ9H098 131 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 EVA1AQ9H8M9 152 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 EFCAB1Q9HAE3 211 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 SLC24A3Q9HC58 644 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 NPDC1Q9NQX5 325 aaPredicted RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 CTPS2Q9NRF8 586 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 CHRNA9Q9UGM1 479 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 ANGPT4Q9Y264 503 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 CHST2Q9Y4C5 530 aa9.58□□□□□ -0.88
LINC00239-201ENST00000556973 UTP20O75691 2785 aaKnown RBP9.58□□□□□ -0.88
LINC00239-201ENST00000556973 DOPEY1Q5JWR5 2465 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 TMED7-TICAM2A0A0A6YYA0 188 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 A0A1W2PNV4 684 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 ZNF208O43345 1280 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 AQP8O94778 261 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 COX4I1P13073 169 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 IGFBP2P18065 325 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 TACR3P29371 465 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 KIR2DL2P43627 348 aaPredicted RBP9.57□□□□□ -0.88
LINC00239-201ENST00000556973 GZMMP51124 257 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 PCBP3P57721 371 aaKnown RBP9.57□□□□□ -0.88
LINC00239-201ENST00000556973 CSNK2A1P68400 391 aaPredicted RBP9.57□□□□□ -0.88
LINC00239-201ENST00000556973 RNPS1Q15287 305 aaKnown RBP9.57□□□□□ -0.88
LINC00239-201ENST00000556973 VMACQ2NL98 169 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 SYT14P1Q58G82 188 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 WBP2NLQ6ICG8 309 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 PPP4R4Q6NUP7 873 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 DHRS4L2Q6PKH6 230 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 TMPPEQ6ZT21 453 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 FAM214BQ7L5A3 538 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 PIGWQ7Z7B1 504 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 SLC43A2Q8N370 569 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 DDIT4LQ96D03 193 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 STARD4Q96DR4 205 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 CMTM5Q96DZ9 223 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 GMPPAQ96IJ6 420 aaPredicted RBP9.57□□□□□ -0.88
LINC00239-201ENST00000556973 OR5B2Q96R09 309 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 HOPXQ9BPY8 73 aaPredicted RBP9.57□□□□□ -0.88
LINC00239-201ENST00000556973 SLC39A3Q9BRY0 314 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 MYLK2Q9H1R3 596 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 OSGIN1Q9UJX0 560 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 AP3M1Q9Y2T2 418 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 TMED7Q9Y3B3 224 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 HDGFL3Q9Y3E1 203 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
LINC00239-201ENST00000556973 ASH1LQ9NR48 2969 aaKnown RBP9.56□□□□□ -0.88
LINC00239-201ENST00000556973 USP9YO00507 2555 aaPredicted RBP9.56□□□□□ -0.88
LINC00239-201ENST00000556973 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 A8MXE2 369 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 EEF1E1-BLOC1S5C9J1V9 151 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 M0QX08 132 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 FXYD1O00168 92 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 SULT2B1O00204 365 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 MSTNO14793 375 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 EEF1E1O43324 174 aaKnown RBP9.56□□□□□ -0.88
LINC00239-201ENST00000556973 TPST1O60507 370 aa9.56□□□□□ -0.88
LINC00239-201ENST00000556973 SS18L1O75177 396 aaPredicted RBP9.56□□□□□ -0.88
LINC00239-201ENST00000556973 PRKD3O94806 890 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms