RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GMPPAQ96IJ6 420 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 DACH2Q96NX9 599 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 THUMPD3Q9BV44 507 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 QRSL1Q9H0R6 528 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ITGB1BP2Q9UKP3 347 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 MCTS1Q9ULC4 181 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 F8P00451 2351 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 DSPPQ9NZW4 1301 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 FAM234BA2RU67 622 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 B2RBV5 119 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 MRASO14807 208 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 HNRNPCL1O60812 293 aaKnown RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 SYNGR4O95473 234 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 IL6P05231 212 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ZCCHC18P0CG32 403 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 KLK2P20151 261 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 AGTR1P30556 359 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 UGT2B10P36537 528 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 IST1P53990 364 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 SESN3P58005 492 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 TXNL4AP83876 142 aaKnown RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 BNIP1Q12981 228 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 GPAT3Q53EU6 434 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 REP15Q6BDI9 236 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 PPP4R4Q6NUP7 873 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 C3orf33Q6P1S2 294 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 PAMR1Q6UXH9 720 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 SPNS3Q6ZMD2 512 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 C22orf34Q6ZV56 151 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 PLEKHM3Q6ZWE6 761 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 EIF3MQ7L2H7 374 aaKnown RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 YTHDF3Q7Z739 585 aaKnown RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 TRIML2Q8N7C3 387 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ABHD3Q8WU67 409 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ROBO4Q8WZ75 1007 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ST8SIA1Q92185 356 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 OSTF1Q92882 214 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 NINJ1Q92982 152 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 CPNE4Q96A23 557 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 VPS33AQ96AX1 596 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 RCN3Q96D15 328 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 AURKBQ96GD4 344 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 TRNT1Q96Q11 434 aaKnown RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 PLEKHF2Q9H8W4 249 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 EXOSC3Q9NQT5 275 aaKnown RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 PLSCR4Q9NRQ2 329 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ACER3Q9NUN7 267 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ST6GALNAC2Q9UJ37 374 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 ING1Q9UK53 422 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 PROCRQ9UNN8 238 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 SLC35A3Q9Y2D2 325 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 NDUFAF1Q9Y375 327 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 EMC9Q9Y3B6 208 aa9.22□□□□□ -0.93
SHMT2-224ENST00000556737 RAI1Q7Z5J4 1906 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-224ENST00000556737 A0A1W2PNR3 127 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 AGAP5A6NIR3 686 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 BBIP1A8MTZ0 92 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 DEFB108AA8MXU0 73 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 ANKRD65E5RJM6 399 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 RFXANKO14593 260 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 AP3D1O14617 1153 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 GYG2O15488 501 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 CYP7B1O75881 506 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 POU2F1P14859 743 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 CD1EP15812 388 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 CARD18P57730 90 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 NCALDP61601 193 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 HPCAP84074 193 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 POU4F3Q15319 338 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 TMEM176BQ3YBM2 270 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-224ENST00000556737 C6orf10Q5SRN2 563 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 PDSS1Q5T2R2 415 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 BLOC1S3Q6QNY0 202 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 LRRC74BQ6ZQY2 392 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 RINLQ6ZS11 566 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF621Q6ZSS3 439 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 PCYOX1LQ8NBM8 494 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 CNOT9Q92600 299 aaKnown RBP9.21□□□□□ -0.94
SHMT2-224ENST00000556737 MCUR1Q96AQ8 359 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 WFIKKN1Q96NZ8 548 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 PRRG4Q9BZD6 226 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 PAIP1Q9H074 479 aaKnown RBP9.21□□□□□ -0.94
SHMT2-224ENST00000556737 CXXC4Q9H2H0 198 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 EFCAB1Q9HAE3 211 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 GLRX2Q9NS18 164 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 KLHL28Q9NXS3 571 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 ELOVL5Q9NYP7 299 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 KLHL13Q9P2N7 655 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 LEF1Q9UJU2 399 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-224ENST00000556737 LIPT1Q9Y234 373 aa9.21□□□□□ -0.94
SHMT2-224ENST00000556737 PRRC2AP48634 2157 aaKnown RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 IGHV3-15A0A0B4J1V0 119 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 GJE1A6NN92 205 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 SMAD9O15198 467 aaKnown RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 ANP32DO95626 131 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 KRT75O95678 551 aa9.2□□□□□ -0.94
SHMT2-224ENST00000556737 PLGP00747 810 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-224ENST00000556737 THBDP07204 575 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms