RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 RNF212BA8MTL3 300 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 A8MV72 311 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 SULT2B1O00204 365 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 GPR171O14626 319 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 ANKRD28O15084 1053 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 CFLARO15519 480 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 NDUFS7O75251 213 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 CSTAP01040 98 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 EDNRAP25101 427 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 PTAFRP25105 342 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 RNF144AP50876 292 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 SESN3P58005 492 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 HBA1P69905 142 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 MAD2L1Q13257 205 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 ARHGAP11BQ3KRB8 267 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 CHRFAM7AQ494W8 412 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 SYT14P1Q58G82 188 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 IL23RQ5VWK5 629 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 KLHL17Q6TDP4 642 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 EIF3MQ7L2H7 374 aaKnown RBP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 GSPT2Q8IYD1 628 aaKnown RBP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 KRTCAP2Q8N6L1 136 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 OR10H5Q8NGA6 315 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 OR5D16Q8NGK9 328 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 MIPOL1Q8TD10 442 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCH1-221ENST00000550914 ZHX1-C8orf76Q96EF9 292 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 C3orf30Q96M34 536 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 DHRS9Q9BPW9 319 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 C1orf50Q9BV19 199 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 ZNF350Q9GZX5 532 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 CBLN4Q9NTU7 201 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 NPAP1Q9NZP6 1156 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 GIMAP2Q9UG22 337 aa11.34□□□□□ -0.59
PTCH1-221ENST00000550914 SVEP1Q4LDE5 3571 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 A0A096LNT2 108 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 C9JVG2 144 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 SSX4O60224 188 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 SLU7O95391 586 aaKnown RBP11.33□□□□□ -0.6
PTCH1-221ENST00000550914 AGR2O95994 175 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 DHRS4L1P0CG22 281 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 MATN1P21941 496 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 TTKP33981 857 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 APOBEC1P41238 236 aaKnown RBP11.33□□□□□ -0.6
PTCH1-221ENST00000550914 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
PTCH1-221ENST00000550914 NUDT6P53370 316 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 SLC16A1P53985 500 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 MERTKQ12866 999 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 GPR68Q15743 365 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 SMU1Q2TAY7 513 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 OR7E24Q6IFN5 339 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 C11orf71Q6IPW1 123 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 CLEC2AQ6UVW9 174 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 C6orf120Q7Z4R8 191 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 RIBC1Q8N443 379 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-221ENST00000550914 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 OR5AK3PQ8NH89 298 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 PIGXQ8TBF5 258 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 TMEM158Q8WZ71 300 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 APH1AQ96BI3 265 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-221ENST00000550914 ZIM3Q96PE6 472 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
PTCH1-221ENST00000550914 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 EXD2Q9NVH0 621 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 TMEM160Q9NX00 188 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 ASIC5Q9NY37 505 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 MALT1Q9UDY8 824 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 CDC42EP3Q9UKI2 254 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 HDGFL3Q9Y3E1 203 aa11.33□□□□□ -0.6
PTCH1-221ENST00000550914 ANK2Q01484 3957 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 E7EQL1 145 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 H7C417 338 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 KIAA0513O60268 411 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 FCMRO60667 390 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 UGT2B17O75795 530 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 CYP7B1O75881 506 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 PMS2P2O95744 297 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 SLC25A16P16260 332 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 SOAT1P35610 550 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 PGM1P36871 562 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 CLDN8P56748 225 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 RPS26P62854 115 aaKnown RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 VLDLRP98155 873 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 LOXL1Q08397 574 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-221ENST00000550914 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 C6orf52Q5T4I8 152 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
PTCH1-221ENST00000550914 C16orf62Q7Z3J2 963 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms