RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 NLKQ9UBE8 527 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 GMFGO60234 142 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 STX11O75558 287 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 SLC22A5O76082 557 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 IL9P15248 144 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
DDX55-209ENST00000542286 KCTD20Q7Z5Y7 419 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 MRGPREQ86SM8 312 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 OR8H3Q8N146 312 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 ZNF619Q8N2I2 560 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 ATP6V1C2Q8NEY4 427 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 TMEM239Q8WW34 195 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 OSTF1Q92882 214 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 ANKRD9Q96BM1 317 aaPredicted RBP13.65□□□□□ -0.22
DDX55-209ENST00000542286 IFT27Q9BW83 186 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
DDX55-209ENST00000542286 FLRT3Q9NZU0 649 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 CDH10Q9Y6N8 788 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 A0A1W2PPK0 400 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 CDHR4A6H8M9 788 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 LINC00862A6NCI5 91 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 UNC119BA6NIH7 251 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 SHISA7A6NL88 538 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 TNFSF14O43557 240 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 GALR3O60755 368 aaPredicted RBP13.65□□□□□ -0.22
DDX55-209ENST00000542286 OR5F1O95221 314 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 GPR75O95800 540 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 CBX7O95931 251 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 EVI2BP34910 448 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 MRPL28Q13084 256 aaKnown RBP13.65□□□□□ -0.22
DDX55-209ENST00000542286 SLC25A30Q5SVS4 291 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 NR2C2APQ86WQ0 139 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 LINC00471Q8N535 108 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 GATSQ8NAP1 163 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 C19orf18Q8NEA5 215 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 OR10H4Q8NGA5 316 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 SPACA7Q96KW9 195 aa13.65□□□□□ -0.22
DDX55-209ENST00000542286 TRAF4Q9BUZ4 470 aaPredicted RBP13.65□□□□□ -0.22
DDX55-209ENST00000542286 FAM240BA0A1B0GVZ2 78 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 SLC9B1P1A6NJY1 282 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 C4orf47A7E2U8 309 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 SLC30A4O14863 429 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 OR10H2O60403 315 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 LYPD3O95274 346 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 THEGLP0DJG4 465 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 AKT2P31751 481 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 STAT5AP42229 794 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 PGDP52209 483 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 RRAS2P62070 204 aaPredicted RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 HHEXQ03014 270 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 PRAMEF8Q5VWM4 474 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 PRAMEF7Q5VXH5 474 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 QSOX2Q6ZRP7 698 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 C9orf62Q8N4C0 152 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 LRRC17Q8N6Y2 441 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 PMEPA1Q969W9 287 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 SENP5Q96HI0 755 aaPredicted RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 HYLS1Q96M11 299 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 RBFOX1Q9NWB1 397 aaKnown RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 H2AFY2Q9P0M6 372 aaPredicted RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 TNFRSF10DQ9UBN6 386 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 TMEM129A0AVI4 362 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 CIB4A0PJX0 185 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 C2orf74A8MZ97 194 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 C2CD4DB7Z1M9 353 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 GABRPO00591 440 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 CHST10O43529 356 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 SERPINI2O75830 405 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 PPP1R3DO95685 299 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 NID1P14543 1247 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 ENPP1P22413 925 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 ZNF267Q14586 743 aaPredicted RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 DDI2Q5TDH0 399 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 OR13C5Q8NGS8 318 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 PTP4A1Q93096 173 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 UPRTQ96BW1 309 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 TIMP4Q99727 224 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 LMAN2LQ9H0V9 348 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 FN3KQ9H479 309 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 GALNT9Q9HCQ5 603 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 ZNF223Q9UK11 482 aaPredicted RBP13.64□□□□□ -0.23
DDX55-209ENST00000542286 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
DDX55-209ENST00000542286 TRAPPC13A5PLN9 417 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 SLC2A2P11168 524 aaPredicted RBP13.63□□□□□ -0.23
DDX55-209ENST00000542286 MAOAP21397 527 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 TPBGQ13641 420 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 TRIQKQ629K1 86 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 SYT9Q86SS6 491 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 RANBP3LQ86VV4 465 aaPredicted RBP13.63□□□□□ -0.23
DDX55-209ENST00000542286 BPIFA2Q96DR5 249 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 TNFRSF13CQ96RJ3 184 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 UCKL1Q9NWZ5 548 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 PTGFRNQ9P2B2 879 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 RP1P56715 2156 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 UNC13CQ8NB66 2214 aa13.63□□□□□ -0.23
DDX55-209ENST00000542286 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.63□□□□□ -0.23
DDX55-209ENST00000542286 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms