RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	OR1D5	P58170	312 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FOXK2	Q01167	660 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BIK	Q13323	160 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MINDY4	Q4G0A6	757 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PLA1A	Q53H76	456 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CTRB2	Q6GPI1	263 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TCEAL6	Q6IPX3	200 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC30A6	Q6NXT4	461 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LYPD4	Q6UWN0	246 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DHRS13	Q6UX07	377 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SYT9	Q86SS6	491 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NUDT13	Q86X67	352 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FRMD1	Q8N878	549 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C19orf47	Q8N9M1	422 aa	Known RBP	5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SNIP1	Q8TAD8	396 aa	Known RBP	5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TCEAL3	Q969E4	200 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RFT1	Q96AA3	541 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	EXOSC8	Q96B26	276 aa	Known RBP	5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CREB3L1	Q96BA8	519 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RBP7	Q96R05	134 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SECISBP2	Q96T21	854 aa	Known RBP	5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	POLDIP3	Q9BY77	421 aa	Known RBP	5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RHBG	Q9H310	441 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ISG20L2	Q9H9L3	353 aa	Known RBP	5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FOLH1B	Q9HBA9	442 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PADI1	Q9ULC6	663 aa		5.26	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SIGLEC5	O15389	551 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UGDH	O60701	494 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	STATH	P02808	62 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FTH1P19	P0C7X4	201 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RNH1	P13489	461 aa	Known RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC1A3	P43003	542 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RAB14	P61106	215 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TBPL1	P62380	186 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GRK1	Q15835	563 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KLHL12	Q53G59	568 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C3orf38	Q5JPI3	329 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HES3	Q5TGS1	186 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BICRAL	Q6AI39	1079 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GPR139	Q6DWJ6	353 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MZT2A	Q6P582	158 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OGFOD3	Q6PK18	319 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLCO4C1	Q6ZQN7	724 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MCAT	Q8IVS2	390 aa	Known RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	IZUMO1	Q8IYV9	350 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF687	Q8N1G0	1237 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR8D4	Q8NGM9	314 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BBS10	Q8TAM1	723 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	APOBEC4	Q8WW27	367 aa	Known RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM131C	Q96AQ9	280 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LINC00052	Q96N35	136 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	IL17F	Q96PD4	163 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SORCS2	Q96PQ0	1159 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MED18	Q9BUE0	208 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM117A	Q9C073	453 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CCDC86	Q9H6F5	360 aa	Known RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KLHL1	Q9NR64	748 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TAS2R7	Q9NYW3	318 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	COPS7A	Q9UBW8	275 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RNF215	Q9Y6U7	377 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TRDV1	A0A1B0GX56	115 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC9B1P1	A6NJY1	282 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SERPINI2	O75830	405 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MT-ND4	P03905	459 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ACP2	P11117	423 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BTC	P35070	178 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FOLR3	P41439	243 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CDH11	P55287	796 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRDX1	Q06830	199 aa	Known RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	IL11RA	Q14626	422 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TMEM81	Q6P7N7	255 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NXPE4	Q6UWF7	544 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ARSK	Q6UWY0	536 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TMEM107	Q6UX40	140 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CFAP77	Q6ZQR2	320 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C6orf120	Q7Z4R8	191 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CAMKMT	Q7Z624	323 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ADGRF3	Q8IZF5	1079 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FTMT	Q8N4E7	242 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TOR1AIP2	Q8NFQ8	470 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR6T1	Q8NGN1	323 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR2T35	Q8NGX2	323 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FBXW5	Q969U6	566 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SPRTN	Q9H040	489 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GHITM	Q9H3K2	345 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RANBP3	Q9H6Z4	567 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FGF21	Q9NSA1	209 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UBQLN2	Q9UHD9	624 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PLAGL1	Q9UM63	463 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	A4GNT	Q9UNA3	340 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FLVCR2	Q9UPI3	526 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RASD1	Q9Y272	281 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CACNG2	Q9Y698	323 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CHD5	Q8TDI0	1954 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NUMA1	Q14980	2115 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRAMEF27	A3QJZ7	478 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SGK494	L7N484	410 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HPX	P02790	462 aa		5.25	□□□□□ -1.57

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