RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DLK1P80370 383 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 VLDLRP98155 873 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RBBP4Q09028 425 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PJVKQ0ZLH3 352 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 SNTB2Q13425 540 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 OR2F1Q13607 317 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 KIAA0141Q14154 515 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 SLC10A1Q14973 349 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 SMAD1Q15797 465 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 DUOXA1Q1HG43 343 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ISXQ2M1V0 245 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 SLC39A12Q504Y0 691 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 USP39Q53GS9 565 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 RAB6CQ53S08 254 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MESTQ5EB52 335 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 FAM102AQ5T9C2 384 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 PRAMEF18Q5VWM3 479 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 HBMQ6B0K9 141 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 NAPEPLDQ6IQ20 393 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RNF165Q6ZSG1 346 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 Q6ZTK2 550 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PTCHD4Q6ZW05 846 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 HIST2H3AQ71DI3 136 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CBLL1Q75N03 491 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 DPPA4Q7L190 304 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 C6orf120Q7Z4R8 191 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 UBE3DQ7Z6J8 389 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 UNC93AQ86WB7 457 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CILP2Q8IUL8 1156 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MFSD6LQ8IWD5 586 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 C7orf61Q8IZ16 206 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 KCNRGQ8N5I3 272 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 EID2Q8N6I1 236 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ZNF614Q8N883 585 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 C19orf47Q8N9M1 422 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 NUDT10Q8NFP7 164 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 OR10G2Q8NGC3 310 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 OR10D4PQ8NGN7 298 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PIGXQ8TBF5 258 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 C16orf78Q8WTQ4 265 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 OIT3Q8WWZ8 545 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PIGKQ92643 395 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RELTQ969Z4 430 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 FBXO17Q96EF6 278 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 WDR89Q96FK6 387 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 KLHL5Q96PQ7 755 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 FCRL5Q96RD9 977 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 TAAR1Q96RJ0 339 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CLCC1Q96S66 551 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PCYT2Q99447 389 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MYOCQ99972 504 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 NRIP2Q9BQI9 281 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CPPED1Q9BRF8 314 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 NAA11Q9BSU3 229 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 FUZQ9BT04 418 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 SNRNP25Q9BV90 132 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 FICDQ9BVA6 458 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 COLEC11Q9BWP8 271 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ADGRE3Q9BY15 652 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 TM6SF2Q9BZW4 377 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RAB6CQ9H0N0 254 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PRO1933Q9H354 126 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 FBXO44Q9H4M3 255 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 NMNAT1Q9HAN9 279 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 CHST11Q9NPF2 352 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 C2orf42Q9NWW7 574 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 FAM120CQ9NX05 1096 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 OPN4Q9UHM6 478 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CCNL1Q9UK58 526 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 SF3B6Q9Y3B4 125 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 ATG4BQ9Y4P1 393 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PCDHB1Q9Y5F3 818 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 IRAK3Q9Y616 596 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 V9GYS6 101 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 UBR3Q6ZT12 1888 aa5.4□□□□□ -1.55
CD44-225ENST00000527326 COL11A2P13942 1736 aaPredicted RBP5.4□□□□□ -1.55
CD44-225ENST00000527326 IGLV3-22A0A075B6J6 115 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 A0A087WUJ7 227 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 ZNF726A6NNF4 738 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 ZAR1LA6NP61 321 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 K7EP13 123 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 HAS3O00219 553 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 TNFRSF11BO00300 401 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 MFNGO00587 321 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 DVL1O14640 695 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 PPP1R2P9O14990 202 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 SCAMP2O15127 329 aaKnown RBP5.39□□□□□ -1.55
CD44-225ENST00000527326 RGS14O43566 566 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 LANCL1O43813 399 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 TSPAN3O60637 253 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 CDC14BO60729 498 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 RPP40O75818 363 aaKnown RBP5.39□□□□□ -1.55
CD44-225ENST00000527326 ZFPL1O95159 310 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 AHSA1O95433 338 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 VNN2O95498 520 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 PMP2P02689 132 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 C8GP07360 202 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 SNRPCP09234 159 aaKnown RBP5.39□□□□□ -1.55
CD44-225ENST00000527326 NPSP0C0P6 89 aa5.39□□□□□ -1.55
CD44-225ENST00000527326 CD79AP11912 226 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms