RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 NET1Q7Z628 596 aaPredicted RBP11.61□□□□□ -0.55
CTSB-209ENST00000525315 SNX32Q86XE0 403 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 ADGRG3Q86Y34 549 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 RP9Q8TA86 221 aaKnown RBP11.61□□□□□ -0.55
CTSB-209ENST00000525315 FNDC9Q8TBE3 224 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 LRRC58Q96CX6 371 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 TRIM8Q9BZR9 551 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 TMEM185BQ9H7F4 350 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 SERINC1Q9NRX5 453 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 ARMCX1Q9P291 453 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 CAPN7Q9Y6W3 813 aa11.61□□□□□ -0.55
CTSB-209ENST00000525315 A0A1W2PNV4 684 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 FXYD1O00168 92 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 MRASO14807 208 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 TNFSF13O75888 250 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 AQP8O94778 261 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 GKN3PP0CG01 181 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 PRKAR1BP31321 381 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 SLC1A3P43003 542 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
CTSB-209ENST00000525315 ASCL1P50553 236 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 PCBP3P57721 371 aaKnown RBP11.6□□□□□ -0.55
CTSB-209ENST00000525315 MTPNP58546 118 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 RAC3P60763 192 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 CAPRIN1Q14444 709 aaKnown RBP11.6□□□□□ -0.55
CTSB-209ENST00000525315 GUSBP1Q15486 140 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 MMEL1Q495T6 779 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 C3orf33Q6P1S2 294 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 ZNF550Q7Z398 422 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 CPLX4Q7Z7G2 160 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 SERPINA11Q86U17 422 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 MTDHQ86UE4 582 aaKnown RBP11.6□□□□□ -0.55
CTSB-209ENST00000525315 DMRTC2Q8IXT2 367 aaPredicted RBP11.6□□□□□ -0.55
CTSB-209ENST00000525315 PCYOX1LQ8NBM8 494 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 HIPK4Q8NE63 616 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 OR8J3Q8NGG0 315 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 STARD4Q96DR4 205 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 SH3GL1Q99961 368 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 SPATA5L1Q9BVQ7 753 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 MYLK2Q9H1R3 596 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 PIGMQ9H3S5 423 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 COQ10BQ9H8M1 238 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 TIGARQ9NQ88 270 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 CTPS2Q9NRF8 586 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 FAM53CQ9NYF3 392 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 MCTS1Q9ULC4 181 aaKnown RBP11.6□□□□□ -0.55
CTSB-209ENST00000525315 FREM1Q5H8C1 2179 aa11.6□□□□□ -0.55
CTSB-209ENST00000525315 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 SYNGR4O95473 234 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 FCGR2AP12318 317 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 COX4I1P13073 169 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 COX6B1P14854 86 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 CLK1P49759 484 aaKnown RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 MAP2K6P52564 334 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 GNGT1P63211 74 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 GTF2IRD2BQ6EKJ0 949 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 DHRS4L2Q6PKH6 230 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 TMPPEQ6ZT21 453 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 PIGWQ7Z7B1 504 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 GTF2IRD2Q86UP8 949 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 CALHM3Q86XJ0 350 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 KRT73Q86Y46 540 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 TREML1Q86YW5 311 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 SLC30A8Q8IWU4 369 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 GCNT2Q8N0V5 402 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 C11orf65Q8NCR3 313 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 ATP6V1C2Q8NEY4 427 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 OR10A6Q8NH74 314 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 SLC25A43Q8WUT9 341 aaPredicted RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 CPNE4Q96A23 557 aaPredicted RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 MARVELD3Q96A59 401 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 ZNF607Q96SK3 696 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 SLC39A3Q9BRY0 314 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 SRXN1Q9BYN0 137 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 PRRG4Q9BZD6 226 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 CACYBPQ9HB71 228 aaKnown RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 CHRNA9Q9UGM1 479 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 FOXD3Q9UJU5 478 aaPredicted RBP11.59□□□□□ -0.55
CTSB-209ENST00000525315 OSGIN1Q9UJX0 560 aa11.59□□□□□ -0.55
CTSB-209ENST00000525315 TMED7-TICAM2A0A0A6YYA0 188 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 A0A1W2PNR3 127 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 A8MXE2 369 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 MSTNO14793 375 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 ZNF208O43345 1280 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 TPST1O60507 370 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 SERPINB7O75635 380 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 MFN2O95140 757 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 CGAP01215 116 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 UQCRBP14927 111 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 TACR3P29371 465 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 POLR2HP52434 150 aaKnown RBP11.58□□□□□ -0.56
CTSB-209ENST00000525315 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
CTSB-209ENST00000525315 SYT14P1Q58G82 188 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
CTSB-209ENST00000525315 VWA1Q6PCB0 445 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms