RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 FCRLAQ7L513 359 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 ZNF550Q7Z398 422 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 ANKRD46Q86W74 232 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 STEAP2Q8NFT2 490 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 ZNF563Q8TA94 476 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 RNF128Q8TEB7 428 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 ROBO4Q8WZ75 1007 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 CMTM5Q96DZ9 223 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 PIP5K1AQ99755 562 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
NR1I3-222ENST00000506018 SLC35A5Q9BS91 424 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 THUMPD3Q9BV44 507 aaKnown RBP9.31□□□□□ -0.92
NR1I3-222ENST00000506018 ZNF350Q9GZX5 532 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 C12orf49Q9H741 205 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 UBTD1Q9HAC8 227 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 SAR1AQ9NR31 198 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 AIG1Q9NVV5 245 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 KLHL9Q9P2J3 617 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 KLHL13Q9P2N7 655 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 MKLN1Q9UL63 735 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 GPR52Q9Y2T5 361 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 CAPN7Q9Y6W3 813 aa9.31□□□□□ -0.92
NR1I3-222ENST00000506018 CCT8L1PA6NM43 557 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 DEFB108AA8MXU0 73 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ANKRD28O15084 1053 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 SLC22A3O75751 556 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 UGT2B17O75795 530 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 UBTFL6P0CB48 400 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 OR12D1P0DN82 309 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 UQCRBP14927 111 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 CD53P19397 219 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 FKBP2P26885 142 aaKnown RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 CCKARP32238 428 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 RNF144AP50876 292 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 RAC3P60763 192 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 CSNK2A1P68400 391 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ADAM8P78325 824 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 GNA13Q14344 377 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ACKR1Q16570 336 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 GPAT3Q53EU6 434 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 SPANXN4Q5MJ08 99 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 SAXO2Q658L1 398 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 HEPHL1Q6MZM0 1159 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 TNFAIP8L2Q6P589 184 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 LRRC75A-AS1Q8N1F1 130 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ZNF619Q8N2I2 560 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 TSPEARQ8WU66 669 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ABHD3Q8WU67 409 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 SLC25A43Q8WUT9 341 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 NUDT8Q8WV74 236 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ROPN1LQ96C74 230 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ZHX1-C8orf76Q96EF9 292 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 NEURL3Q96EH8 262 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 PANX1Q96RD7 426 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 CCL19Q99731 98 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 NPAS1Q99742 590 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ACTR6Q9GZN1 396 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 SDR39U1Q9NRG7 319 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-222ENST00000506018 BTNL2Q9UIR0 455 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 LIPT1Q9Y234 373 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 GPR45Q9Y5Y3 372 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 FREM1Q5H8C1 2179 aa9.3□□□□□ -0.92
NR1I3-222ENST00000506018 MAP1AP78559 2803 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 KIAA0513O60268 411 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 FCMRO60667 390 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 HNRNPCL1O60812 293 aaKnown RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 ATP5HO75947 161 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 IL6P05231 212 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 PGRP06401 933 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 YES1P07947 543 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 ALDOCP09972 364 aaKnown RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 PSMB1P20618 241 aaKnown RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 ENPP1P22413 925 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 IL32P24001 234 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 PRDX6P30041 224 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 APOBEC1P41238 236 aaKnown RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 RASSF2P50749 326 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 NKX6-1P78426 367 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 MERTKQ12866 999 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 SKP2Q13309 424 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 TOMM34Q15785 309 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 NDUFAF6Q330K2 333 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 TIGD2Q4W5G0 525 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 FAM91A1Q658Y4 838 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 ANKRD34AQ69YU3 496 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 STAC2Q6ZMT1 411 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 SSX8Q7RTT4 187 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 WFDC8Q8IUA0 241 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 CLEC4FQ8N1N0 589 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 RP9Q8TA86 221 aaKnown RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 CCDC115Q96NT0 180 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 OR5B2Q96R09 309 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 OR52E6Q96RD3 313 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 SRXN1Q9BYN0 137 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 MYLK2Q9H1R3 596 aa9.29□□□□□ -0.92
NR1I3-222ENST00000506018 CACYBPQ9HB71 228 aaKnown RBP9.29□□□□□ -0.92
NR1I3-222ENST00000506018 EMC3Q9P0I2 261 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms